Protein–RNA interactions for Protein: Q6T3U4

Npc1l1, Niemann-Pick C1-like protein 1, mousemouse

Predictions only

Length 1,333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1l1Q6T3U4 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Npc1l1Q6T3U4 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Npc1l1Q6T3U4 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Npc1l1Q6T3U4 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Npc1l1Q6T3U4 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Npc1l1Q6T3U4 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC18.84■□□□□ 0.61
Npc1l1Q6T3U4 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Npc1l1Q6T3U4 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
Npc1l1Q6T3U4 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Npc1l1Q6T3U4 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC18.83■□□□□ 0.61
Npc1l1Q6T3U4 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Npc1l1Q6T3U4 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Npc1l1Q6T3U4 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Npc1l1Q6T3U4 Gm25911-201ENSMUST00000157621 56 ntBASIC18.83■□□□□ 0.61
Npc1l1Q6T3U4 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Npc1l1Q6T3U4 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC18.83■□□□□ 0.61
Npc1l1Q6T3U4 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Npc1l1Q6T3U4 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Npc1l1Q6T3U4 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Npc1l1Q6T3U4 Gm26917-202ENSMUST00000192833 3329 ntBASIC18.83■□□□□ 0.6
Npc1l1Q6T3U4 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Npc1l1Q6T3U4 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Npc1l1Q6T3U4 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Npc1l1Q6T3U4 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Npc1l1Q6T3U4 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Npc1l1Q6T3U4 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Npc1l1Q6T3U4 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Npc1l1Q6T3U4 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC18.83■□□□□ 0.6
Npc1l1Q6T3U4 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Npc1l1Q6T3U4 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Npc1l1Q6T3U4 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Npc1l1Q6T3U4 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Npc1l1Q6T3U4 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC18.82■□□□□ 0.6
Npc1l1Q6T3U4 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Npc1l1Q6T3U4 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Npc1l1Q6T3U4 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Npc1l1Q6T3U4 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
Npc1l1Q6T3U4 Gm19164-201ENSMUST00000210667 640 ntBASIC18.82■□□□□ 0.6
Npc1l1Q6T3U4 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC18.82■□□□□ 0.6
Npc1l1Q6T3U4 AC093926.2-201ENSMUST00000214468 1228 ntBASIC18.82■□□□□ 0.6
Npc1l1Q6T3U4 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Npc1l1Q6T3U4 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Npc1l1Q6T3U4 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC18.82■□□□□ 0.6
Npc1l1Q6T3U4 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Npc1l1Q6T3U4 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Npc1l1Q6T3U4 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Npc1l1Q6T3U4 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Npc1l1Q6T3U4 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Npc1l1Q6T3U4 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Npc1l1Q6T3U4 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Npc1l1Q6T3U4 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Npc1l1Q6T3U4 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Npc1l1Q6T3U4 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Npc1l1Q6T3U4 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Npc1l1Q6T3U4 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Npc1l1Q6T3U4 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Npc1l1Q6T3U4 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Npc1l1Q6T3U4 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
Npc1l1Q6T3U4 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Npc1l1Q6T3U4 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Npc1l1Q6T3U4 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
Npc1l1Q6T3U4 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Npc1l1Q6T3U4 Gm15358-201ENSMUST00000119249 520 ntBASIC18.81■□□□□ 0.6
Npc1l1Q6T3U4 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Npc1l1Q6T3U4 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC18.81■□□□□ 0.6
Npc1l1Q6T3U4 Gm45683-201ENSMUST00000210825 1247 ntBASIC18.81■□□□□ 0.6
Npc1l1Q6T3U4 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Npc1l1Q6T3U4 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Npc1l1Q6T3U4 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Npc1l1Q6T3U4 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Npc1l1Q6T3U4 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC18.81■□□□□ 0.6
Npc1l1Q6T3U4 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Npc1l1Q6T3U4 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Npc1l1Q6T3U4 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Npc1l1Q6T3U4 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Npc1l1Q6T3U4 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Npc1l1Q6T3U4 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Npc1l1Q6T3U4 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Npc1l1Q6T3U4 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Npc1l1Q6T3U4 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC18.8■□□□□ 0.6
Npc1l1Q6T3U4 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Npc1l1Q6T3U4 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Npc1l1Q6T3U4 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Npc1l1Q6T3U4 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Npc1l1Q6T3U4 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Npc1l1Q6T3U4 Gm5682-201ENSMUST00000173402 505 ntBASIC18.8■□□□□ 0.6
Npc1l1Q6T3U4 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Npc1l1Q6T3U4 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Npc1l1Q6T3U4 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Npc1l1Q6T3U4 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Npc1l1Q6T3U4 Gm10175-201ENSMUST00000086013 645 ntBASIC18.8■□□□□ 0.6
Npc1l1Q6T3U4 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Npc1l1Q6T3U4 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Npc1l1Q6T3U4 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Npc1l1Q6T3U4 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Npc1l1Q6T3U4 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Npc1l1Q6T3U4 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Npc1l1Q6T3U4 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Npc1l1Q6T3U4 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Npc1l1Q6T3U4 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC18.79■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms