Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.38■□□□□ 0.85
Chd4Q6PDQ2 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC20.38■□□□□ 0.85
Chd4Q6PDQ2 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Chd4Q6PDQ2 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Chd4Q6PDQ2 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Chd4Q6PDQ2 Ntrk2-205ENSMUST00000224402 2284 ntBASIC20.38■□□□□ 0.85
Chd4Q6PDQ2 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Chd4Q6PDQ2 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Chd4Q6PDQ2 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC20.38■□□□□ 0.85
Chd4Q6PDQ2 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Chd4Q6PDQ2 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC20.38■□□□□ 0.85
Chd4Q6PDQ2 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Chd4Q6PDQ2 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Chd4Q6PDQ2 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Chd4Q6PDQ2 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Chd4Q6PDQ2 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC20.38■□□□□ 0.85
Chd4Q6PDQ2 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Chd4Q6PDQ2 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Chd4Q6PDQ2 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Chd4Q6PDQ2 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC20.37■□□□□ 0.85
Chd4Q6PDQ2 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC20.37■□□□□ 0.85
Chd4Q6PDQ2 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Chd4Q6PDQ2 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Chd4Q6PDQ2 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC20.37■□□□□ 0.85
Chd4Q6PDQ2 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC20.37■□□□□ 0.85
Chd4Q6PDQ2 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Chd4Q6PDQ2 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Chd4Q6PDQ2 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Chd4Q6PDQ2 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Chd4Q6PDQ2 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC20.37■□□□□ 0.85
Chd4Q6PDQ2 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC20.37■□□□□ 0.85
Chd4Q6PDQ2 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
Chd4Q6PDQ2 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC20.37■□□□□ 0.85
Chd4Q6PDQ2 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC20.37■□□□□ 0.85
Chd4Q6PDQ2 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Chd4Q6PDQ2 Gm38294-201ENSMUST00000192831 381 ntBASIC20.37■□□□□ 0.85
Chd4Q6PDQ2 Gm20949-201ENSMUST00000206478 952 ntBASIC20.37■□□□□ 0.85
Chd4Q6PDQ2 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Chd4Q6PDQ2 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
Chd4Q6PDQ2 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Chd4Q6PDQ2 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Chd4Q6PDQ2 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Chd4Q6PDQ2 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Chd4Q6PDQ2 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC20.36■□□□□ 0.85
Chd4Q6PDQ2 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Chd4Q6PDQ2 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Chd4Q6PDQ2 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Chd4Q6PDQ2 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Chd4Q6PDQ2 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.36■□□□□ 0.85
Chd4Q6PDQ2 Gm7336-201ENSMUST00000107041 1232 ntBASIC20.36■□□□□ 0.85
Chd4Q6PDQ2 Gm18889-201ENSMUST00000174284 929 ntBASIC20.36■□□□□ 0.85
Chd4Q6PDQ2 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Chd4Q6PDQ2 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Chd4Q6PDQ2 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Chd4Q6PDQ2 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Chd4Q6PDQ2 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Chd4Q6PDQ2 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Chd4Q6PDQ2 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Chd4Q6PDQ2 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Chd4Q6PDQ2 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Chd4Q6PDQ2 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Chd4Q6PDQ2 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Chd4Q6PDQ2 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Chd4Q6PDQ2 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC20.35■□□□□ 0.85
Chd4Q6PDQ2 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Chd4Q6PDQ2 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC20.35■□□□□ 0.85
Chd4Q6PDQ2 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Chd4Q6PDQ2 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Chd4Q6PDQ2 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Chd4Q6PDQ2 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Chd4Q6PDQ2 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Chd4Q6PDQ2 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Chd4Q6PDQ2 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Chd4Q6PDQ2 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Chd4Q6PDQ2 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Chd4Q6PDQ2 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Chd4Q6PDQ2 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Chd4Q6PDQ2 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Chd4Q6PDQ2 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC20.35■□□□□ 0.85
Chd4Q6PDQ2 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Chd4Q6PDQ2 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Chd4Q6PDQ2 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Chd4Q6PDQ2 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Chd4Q6PDQ2 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Chd4Q6PDQ2 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC20.35■□□□□ 0.85
Chd4Q6PDQ2 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC20.35■□□□□ 0.85
Chd4Q6PDQ2 AC131710.1-201ENSMUST00000228336 990 ntBASIC20.35■□□□□ 0.85
Chd4Q6PDQ2 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Chd4Q6PDQ2 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Chd4Q6PDQ2 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Chd4Q6PDQ2 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC20.35■□□□□ 0.85
Chd4Q6PDQ2 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Chd4Q6PDQ2 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Chd4Q6PDQ2 Gm43072-201ENSMUST00000200283 1671 ntBASIC20.34■□□□□ 0.85
Chd4Q6PDQ2 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Chd4Q6PDQ2 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC20.34■□□□□ 0.85
Chd4Q6PDQ2 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Chd4Q6PDQ2 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Chd4Q6PDQ2 Gm6973-201ENSMUST00000117080 721 ntBASIC20.34■□□□□ 0.85
Chd4Q6PDQ2 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC20.34■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms