Protein–RNA interactions for Protein: Q6PD21

Shb, SH2 domain-containing adapter protein B, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShbQ6PD21 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ShbQ6PD21 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ShbQ6PD21 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
ShbQ6PD21 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
ShbQ6PD21 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ShbQ6PD21 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
ShbQ6PD21 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
ShbQ6PD21 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ShbQ6PD21 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
ShbQ6PD21 Gm42934-201ENSMUST00000196920 1345 ntBASIC16.91■□□□□ 0.3
ShbQ6PD21 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ShbQ6PD21 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
ShbQ6PD21 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ShbQ6PD21 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ShbQ6PD21 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
ShbQ6PD21 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC16.9■□□□□ 0.3
ShbQ6PD21 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
ShbQ6PD21 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ShbQ6PD21 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ShbQ6PD21 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
ShbQ6PD21 Gm15321-201ENSMUST00000121290 288 ntBASIC16.9■□□□□ 0.3
ShbQ6PD21 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC16.9■□□□□ 0.3
ShbQ6PD21 Gm27680-201ENSMUST00000184192 160 ntBASIC16.9■□□□□ 0.3
ShbQ6PD21 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
ShbQ6PD21 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ShbQ6PD21 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ShbQ6PD21 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
ShbQ6PD21 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ShbQ6PD21 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ShbQ6PD21 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC16.9■□□□□ 0.3
ShbQ6PD21 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ShbQ6PD21 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
ShbQ6PD21 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
ShbQ6PD21 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
ShbQ6PD21 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
ShbQ6PD21 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
ShbQ6PD21 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
ShbQ6PD21 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
ShbQ6PD21 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
ShbQ6PD21 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
ShbQ6PD21 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ShbQ6PD21 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ShbQ6PD21 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
ShbQ6PD21 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
ShbQ6PD21 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ShbQ6PD21 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ShbQ6PD21 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ShbQ6PD21 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ShbQ6PD21 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC16.89■□□□□ 0.29
ShbQ6PD21 Gm18766-201ENSMUST00000189811 808 ntBASIC16.89■□□□□ 0.29
ShbQ6PD21 Gm28631-201ENSMUST00000190740 334 ntBASIC16.89■□□□□ 0.29
ShbQ6PD21 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ShbQ6PD21 Gm18049-201ENSMUST00000208909 581 ntBASIC16.89■□□□□ 0.29
ShbQ6PD21 AC154239.3-201ENSMUST00000226933 674 ntBASIC16.89■□□□□ 0.29
ShbQ6PD21 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ShbQ6PD21 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
ShbQ6PD21 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
ShbQ6PD21 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ShbQ6PD21 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC16.89■□□□□ 0.29
ShbQ6PD21 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ShbQ6PD21 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC16.89■□□□□ 0.29
ShbQ6PD21 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ShbQ6PD21 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC16.89■□□□□ 0.29
ShbQ6PD21 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC16.89■□□□□ 0.29
ShbQ6PD21 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
ShbQ6PD21 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC16.88■□□□□ 0.29
ShbQ6PD21 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ShbQ6PD21 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
ShbQ6PD21 AL593843.1-201ENSMUST00000195891 145 ntBASIC16.88■□□□□ 0.29
ShbQ6PD21 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ShbQ6PD21 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC16.88■□□□□ 0.29
ShbQ6PD21 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ShbQ6PD21 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC16.88■□□□□ 0.29
ShbQ6PD21 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
ShbQ6PD21 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
ShbQ6PD21 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ShbQ6PD21 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ShbQ6PD21 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
ShbQ6PD21 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
ShbQ6PD21 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ShbQ6PD21 Gm7901-201ENSMUST00000120430 1597 ntBASIC16.87■□□□□ 0.29
ShbQ6PD21 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
ShbQ6PD21 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC16.87■□□□□ 0.29
ShbQ6PD21 Gm12859-201ENSMUST00000117834 427 ntBASIC16.87■□□□□ 0.29
ShbQ6PD21 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC16.87■□□□□ 0.29
ShbQ6PD21 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ShbQ6PD21 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC16.87■□□□□ 0.29
ShbQ6PD21 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC16.87■□□□□ 0.29
ShbQ6PD21 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC16.87■□□□□ 0.29
ShbQ6PD21 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ShbQ6PD21 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
ShbQ6PD21 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ShbQ6PD21 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ShbQ6PD21 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
ShbQ6PD21 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ShbQ6PD21 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC16.87■□□□□ 0.29
ShbQ6PD21 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ShbQ6PD21 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
ShbQ6PD21 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ShbQ6PD21 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms