Protein–RNA interactions for Protein: Q6PAV2

Herc4, Probable E3 ubiquitin-protein ligase HERC4, mousemouse

Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc4Q6PAV2 Gm4609-201ENSMUST00000106443 1002 ntBASIC17.4■□□□□ 0.38
Herc4Q6PAV2 Gm5138-201ENSMUST00000113842 1002 ntBASIC17.4■□□□□ 0.38
Herc4Q6PAV2 Gm15191-201ENSMUST00000117933 1000 ntBASIC17.4■□□□□ 0.38
Herc4Q6PAV2 Gm12182-201ENSMUST00000118655 1008 ntBASIC17.4■□□□□ 0.38
Herc4Q6PAV2 Gm13882-201ENSMUST00000120886 1002 ntBASIC17.4■□□□□ 0.38
Herc4Q6PAV2 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
Herc4Q6PAV2 Gm10284-201ENSMUST00000145057 1005 ntBASIC17.4■□□□□ 0.38
Herc4Q6PAV2 Gm10481-201ENSMUST00000179228 1002 ntBASIC17.4■□□□□ 0.38
Herc4Q6PAV2 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC17.4■□□□□ 0.38
Herc4Q6PAV2 Gm2574-201ENSMUST00000181051 1002 ntBASIC17.4■□□□□ 0.38
Herc4Q6PAV2 Gm3200-201ENSMUST00000181493 1002 ntBASIC17.4■□□□□ 0.38
Herc4Q6PAV2 Gm8825-201ENSMUST00000182565 998 ntBASIC17.4■□□□□ 0.38
Herc4Q6PAV2 Gm4518-201ENSMUST00000182638 718 ntBASIC17.4■□□□□ 0.38
Herc4Q6PAV2 Gm8330-201ENSMUST00000182754 1008 ntBASIC17.4■□□□□ 0.38
Herc4Q6PAV2 Gm4575-201ENSMUST00000182991 1002 ntBASIC17.4■□□□□ 0.38
Herc4Q6PAV2 Gm8709-201ENSMUST00000183230 1012 ntBASIC17.4■□□□□ 0.38
Herc4Q6PAV2 Gm28033-201ENSMUST00000184224 96 ntBASIC17.4■□□□□ 0.38
Herc4Q6PAV2 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Herc4Q6PAV2 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Herc4Q6PAV2 Gm10293-201ENSMUST00000076317 1002 ntBASIC17.4■□□□□ 0.38
Herc4Q6PAV2 Gm6316-201ENSMUST00000082064 1020 ntBASIC17.4■□□□□ 0.38
Herc4Q6PAV2 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Herc4Q6PAV2 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
Herc4Q6PAV2 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Herc4Q6PAV2 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Herc4Q6PAV2 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
Herc4Q6PAV2 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Herc4Q6PAV2 AC133083.1-201ENSMUST00000221736 2209 ntBASIC17.4■□□□□ 0.38
Herc4Q6PAV2 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Herc4Q6PAV2 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Herc4Q6PAV2 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Herc4Q6PAV2 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Herc4Q6PAV2 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Herc4Q6PAV2 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Herc4Q6PAV2 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Herc4Q6PAV2 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Herc4Q6PAV2 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Herc4Q6PAV2 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Herc4Q6PAV2 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Herc4Q6PAV2 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Herc4Q6PAV2 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Herc4Q6PAV2 Gm9103-201ENSMUST00000119371 405 ntBASIC17.39■□□□□ 0.37
Herc4Q6PAV2 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Herc4Q6PAV2 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Herc4Q6PAV2 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
Herc4Q6PAV2 Cmtm5-203ENSMUST00000227441 610 ntBASIC17.39■□□□□ 0.37
Herc4Q6PAV2 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Herc4Q6PAV2 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
Herc4Q6PAV2 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Herc4Q6PAV2 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Herc4Q6PAV2 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Herc4Q6PAV2 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Herc4Q6PAV2 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Herc4Q6PAV2 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Herc4Q6PAV2 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Herc4Q6PAV2 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Herc4Q6PAV2 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Herc4Q6PAV2 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Herc4Q6PAV2 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Herc4Q6PAV2 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC17.38■□□□□ 0.37
Herc4Q6PAV2 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Herc4Q6PAV2 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Herc4Q6PAV2 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Herc4Q6PAV2 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Herc4Q6PAV2 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Herc4Q6PAV2 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Herc4Q6PAV2 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC17.38■□□□□ 0.37
Herc4Q6PAV2 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC17.38■□□□□ 0.37
Herc4Q6PAV2 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Herc4Q6PAV2 Gm7506-201ENSMUST00000207758 815 ntBASIC17.38■□□□□ 0.37
Herc4Q6PAV2 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC17.38■□□□□ 0.37
Herc4Q6PAV2 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Herc4Q6PAV2 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Herc4Q6PAV2 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Herc4Q6PAV2 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
Herc4Q6PAV2 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Herc4Q6PAV2 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Herc4Q6PAV2 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Herc4Q6PAV2 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC17.37■□□□□ 0.37
Herc4Q6PAV2 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Herc4Q6PAV2 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Herc4Q6PAV2 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Herc4Q6PAV2 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Herc4Q6PAV2 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Herc4Q6PAV2 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Herc4Q6PAV2 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC17.37■□□□□ 0.37
Herc4Q6PAV2 Gm12644-201ENSMUST00000119935 606 ntBASIC17.37■□□□□ 0.37
Herc4Q6PAV2 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC17.37■□□□□ 0.37
Herc4Q6PAV2 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Herc4Q6PAV2 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Herc4Q6PAV2 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Herc4Q6PAV2 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC17.37■□□□□ 0.37
Herc4Q6PAV2 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Herc4Q6PAV2 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Herc4Q6PAV2 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
Herc4Q6PAV2 Ccdc166-201ENSMUST00000182172 2584 ntBASIC17.36■□□□□ 0.37
Herc4Q6PAV2 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Herc4Q6PAV2 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Herc4Q6PAV2 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Herc4Q6PAV2 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms