Protein–RNA interactions for Protein: Q6P1Y1

Rtl3, Retrotransposon Gag-like protein 3, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl3Q6P1Y1 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC16.26■□□□□ 0.19
Rtl3Q6P1Y1 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rtl3Q6P1Y1 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Rtl3Q6P1Y1 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Rtl3Q6P1Y1 Rbfox2-207ENSMUST00000227533 1041 ntBASIC16.26■□□□□ 0.19
Rtl3Q6P1Y1 AC117588.1-201ENSMUST00000228510 999 ntBASIC16.26■□□□□ 0.19
Rtl3Q6P1Y1 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Rtl3Q6P1Y1 Gm44729-201ENSMUST00000206759 2052 ntBASIC16.26■□□□□ 0.19
Rtl3Q6P1Y1 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rtl3Q6P1Y1 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rtl3Q6P1Y1 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rtl3Q6P1Y1 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC16.26■□□□□ 0.19
Rtl3Q6P1Y1 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rtl3Q6P1Y1 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Rtl3Q6P1Y1 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rtl3Q6P1Y1 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rtl3Q6P1Y1 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
Rtl3Q6P1Y1 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Rtl3Q6P1Y1 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rtl3Q6P1Y1 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rtl3Q6P1Y1 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rtl3Q6P1Y1 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rtl3Q6P1Y1 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rtl3Q6P1Y1 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC16.25■□□□□ 0.19
Rtl3Q6P1Y1 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Rtl3Q6P1Y1 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC16.25■□□□□ 0.19
Rtl3Q6P1Y1 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Rtl3Q6P1Y1 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC16.25■□□□□ 0.19
Rtl3Q6P1Y1 Gm6376-201ENSMUST00000209407 580 ntBASIC16.25■□□□□ 0.19
Rtl3Q6P1Y1 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC16.25■□□□□ 0.19
Rtl3Q6P1Y1 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rtl3Q6P1Y1 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rtl3Q6P1Y1 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Rtl3Q6P1Y1 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rtl3Q6P1Y1 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Rtl3Q6P1Y1 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rtl3Q6P1Y1 Gm8784-201ENSMUST00000222096 1435 ntBASIC16.25■□□□□ 0.19
Rtl3Q6P1Y1 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rtl3Q6P1Y1 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rtl3Q6P1Y1 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Rtl3Q6P1Y1 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rtl3Q6P1Y1 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rtl3Q6P1Y1 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rtl3Q6P1Y1 Zkscan3-208ENSMUST00000224820 5398 ntBASIC16.24■□□□□ 0.19
Rtl3Q6P1Y1 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rtl3Q6P1Y1 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rtl3Q6P1Y1 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rtl3Q6P1Y1 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rtl3Q6P1Y1 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rtl3Q6P1Y1 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC16.24■□□□□ 0.19
Rtl3Q6P1Y1 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Rtl3Q6P1Y1 Gm25925-201ENSMUST00000158314 306 ntBASIC16.24■□□□□ 0.19
Rtl3Q6P1Y1 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC16.24■□□□□ 0.19
Rtl3Q6P1Y1 Gm8655-201ENSMUST00000221159 852 ntBASIC16.24■□□□□ 0.19
Rtl3Q6P1Y1 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rtl3Q6P1Y1 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rtl3Q6P1Y1 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Rtl3Q6P1Y1 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rtl3Q6P1Y1 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC16.24■□□□□ 0.19
Rtl3Q6P1Y1 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rtl3Q6P1Y1 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rtl3Q6P1Y1 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Rtl3Q6P1Y1 Gm5837-201ENSMUST00000191844 1369 ntBASIC16.24■□□□□ 0.19
Rtl3Q6P1Y1 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rtl3Q6P1Y1 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rtl3Q6P1Y1 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC16.24■□□□□ 0.19
Rtl3Q6P1Y1 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rtl3Q6P1Y1 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rtl3Q6P1Y1 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC16.23■□□□□ 0.19
Rtl3Q6P1Y1 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rtl3Q6P1Y1 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rtl3Q6P1Y1 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rtl3Q6P1Y1 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC16.23■□□□□ 0.19
Rtl3Q6P1Y1 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rtl3Q6P1Y1 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC16.23■□□□□ 0.19
Rtl3Q6P1Y1 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Rtl3Q6P1Y1 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rtl3Q6P1Y1 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rtl3Q6P1Y1 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
Rtl3Q6P1Y1 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Rtl3Q6P1Y1 Ntrk2-205ENSMUST00000224402 2284 ntBASIC16.23■□□□□ 0.19
Rtl3Q6P1Y1 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Rtl3Q6P1Y1 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Rtl3Q6P1Y1 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rtl3Q6P1Y1 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Rtl3Q6P1Y1 Gm4535-201ENSMUST00000182274 558 ntBASIC16.23■□□□□ 0.19
Rtl3Q6P1Y1 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Rtl3Q6P1Y1 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC16.23■□□□□ 0.19
Rtl3Q6P1Y1 Gm18622-201ENSMUST00000219361 595 ntBASIC16.23■□□□□ 0.19
Rtl3Q6P1Y1 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rtl3Q6P1Y1 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC16.23■□□□□ 0.19
Rtl3Q6P1Y1 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Rtl3Q6P1Y1 Gm10355-201ENSMUST00000097146 517 ntBASIC16.23■□□□□ 0.19
Rtl3Q6P1Y1 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC16.23■□□□□ 0.19
Rtl3Q6P1Y1 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Rtl3Q6P1Y1 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rtl3Q6P1Y1 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rtl3Q6P1Y1 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rtl3Q6P1Y1 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Rtl3Q6P1Y1 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms