Protein–RNA interactions for Protein: Q6DD96

Pcdhga7, Protocadherin gamma subfamily A, 7, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga7Q6DD96 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhga7Q6DD96 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhga7Q6DD96 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC15.31■□□□□ 0.04
Pcdhga7Q6DD96 Gm10013-201ENSMUST00000106074 672 ntBASIC15.31■□□□□ 0.04
Pcdhga7Q6DD96 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhga7Q6DD96 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC15.31■□□□□ 0.04
Pcdhga7Q6DD96 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC15.31■□□□□ 0.04
Pcdhga7Q6DD96 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC15.31■□□□□ 0.04
Pcdhga7Q6DD96 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhga7Q6DD96 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Pcdhga7Q6DD96 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhga7Q6DD96 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhga7Q6DD96 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhga7Q6DD96 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Pcdhga7Q6DD96 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhga7Q6DD96 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhga7Q6DD96 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhga7Q6DD96 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhga7Q6DD96 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhga7Q6DD96 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhga7Q6DD96 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Pcdhga7Q6DD96 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhga7Q6DD96 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhga7Q6DD96 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhga7Q6DD96 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhga7Q6DD96 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhga7Q6DD96 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhga7Q6DD96 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Pcdhga7Q6DD96 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhga7Q6DD96 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhga7Q6DD96 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhga7Q6DD96 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Pcdhga7Q6DD96 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhga7Q6DD96 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhga7Q6DD96 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC15.3■□□□□ 0.04
Pcdhga7Q6DD96 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC15.3■□□□□ 0.04
Pcdhga7Q6DD96 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhga7Q6DD96 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC15.3■□□□□ 0.04
Pcdhga7Q6DD96 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhga7Q6DD96 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhga7Q6DD96 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Pcdhga7Q6DD96 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC15.3■□□□□ 0.04
Pcdhga7Q6DD96 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC15.3■□□□□ 0.04
Pcdhga7Q6DD96 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhga7Q6DD96 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Pcdhga7Q6DD96 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhga7Q6DD96 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhga7Q6DD96 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhga7Q6DD96 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhga7Q6DD96 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhga7Q6DD96 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhga7Q6DD96 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhga7Q6DD96 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhga7Q6DD96 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Pcdhga7Q6DD96 Gm45133-201ENSMUST00000207548 2773 ntBASIC15.3■□□□□ 0.04
Pcdhga7Q6DD96 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhga7Q6DD96 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Pcdhga7Q6DD96 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Pcdhga7Q6DD96 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhga7Q6DD96 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhga7Q6DD96 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhga7Q6DD96 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Pcdhga7Q6DD96 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhga7Q6DD96 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhga7Q6DD96 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhga7Q6DD96 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhga7Q6DD96 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhga7Q6DD96 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhga7Q6DD96 Gm9013-201ENSMUST00000132939 882 ntBASIC15.29■□□□□ 0.04
Pcdhga7Q6DD96 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhga7Q6DD96 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhga7Q6DD96 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhga7Q6DD96 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhga7Q6DD96 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Pcdhga7Q6DD96 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhga7Q6DD96 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhga7Q6DD96 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhga7Q6DD96 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhga7Q6DD96 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhga7Q6DD96 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC15.29■□□□□ 0.04
Pcdhga7Q6DD96 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC15.29■□□□□ 0.04
Pcdhga7Q6DD96 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhga7Q6DD96 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhga7Q6DD96 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhga7Q6DD96 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhga7Q6DD96 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhga7Q6DD96 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhga7Q6DD96 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC15.28■□□□□ 0.04
Pcdhga7Q6DD96 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhga7Q6DD96 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Pcdhga7Q6DD96 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhga7Q6DD96 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhga7Q6DD96 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhga7Q6DD96 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhga7Q6DD96 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhga7Q6DD96 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhga7Q6DD96 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhga7Q6DD96 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhga7Q6DD96 Gm10231-201ENSMUST00000181584 441 ntBASIC15.28■□□□□ 0.04
Pcdhga7Q6DD96 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms