Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Clcn1Q64347 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
Clcn1Q64347 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Clcn1Q64347 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Clcn1Q64347 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Clcn1Q64347 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Clcn1Q64347 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Clcn1Q64347 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Clcn1Q64347 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Clcn1Q64347 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC19.86■□□□□ 0.77
Clcn1Q64347 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Clcn1Q64347 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Clcn1Q64347 Best4-ps-201ENSMUST00000129783 1380 ntBASIC19.86■□□□□ 0.77
Clcn1Q64347 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Clcn1Q64347 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Clcn1Q64347 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Clcn1Q64347 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Clcn1Q64347 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Clcn1Q64347 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
Clcn1Q64347 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC19.86■□□□□ 0.77
Clcn1Q64347 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Clcn1Q64347 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Clcn1Q64347 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Clcn1Q64347 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Clcn1Q64347 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Clcn1Q64347 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Clcn1Q64347 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Clcn1Q64347 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Clcn1Q64347 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Clcn1Q64347 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Clcn1Q64347 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Clcn1Q64347 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Clcn1Q64347 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Clcn1Q64347 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Clcn1Q64347 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Clcn1Q64347 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Clcn1Q64347 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Clcn1Q64347 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Clcn1Q64347 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Clcn1Q64347 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Clcn1Q64347 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Clcn1Q64347 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Clcn1Q64347 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Clcn1Q64347 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Clcn1Q64347 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
Clcn1Q64347 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC19.85■□□□□ 0.77
Clcn1Q64347 Gm17271-201ENSMUST00000165535 355 ntBASIC19.85■□□□□ 0.77
Clcn1Q64347 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Clcn1Q64347 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
Clcn1Q64347 AC124549.3-201ENSMUST00000225541 367 ntBASIC19.85■□□□□ 0.77
Clcn1Q64347 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Clcn1Q64347 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC19.85■□□□□ 0.77
Clcn1Q64347 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Clcn1Q64347 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Clcn1Q64347 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
Clcn1Q64347 Gm38318-201ENSMUST00000195769 1706 ntBASIC19.85■□□□□ 0.77
Clcn1Q64347 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Clcn1Q64347 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Clcn1Q64347 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Clcn1Q64347 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC19.84■□□□□ 0.77
Clcn1Q64347 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Clcn1Q64347 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Clcn1Q64347 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Clcn1Q64347 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Clcn1Q64347 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC19.84■□□□□ 0.77
Clcn1Q64347 Gm8344-201ENSMUST00000119813 856 ntBASIC19.84■□□□□ 0.77
Clcn1Q64347 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC19.84■□□□□ 0.77
Clcn1Q64347 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Clcn1Q64347 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC19.84■□□□□ 0.77
Clcn1Q64347 Gm9682-201ENSMUST00000197505 556 ntBASIC19.84■□□□□ 0.77
Clcn1Q64347 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Clcn1Q64347 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Clcn1Q64347 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC19.84■□□□□ 0.77
Clcn1Q64347 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Clcn1Q64347 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Clcn1Q64347 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Clcn1Q64347 Gm26596-201ENSMUST00000180464 2655 ntBASIC19.84■□□□□ 0.77
Clcn1Q64347 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC19.84■□□□□ 0.77
Clcn1Q64347 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Clcn1Q64347 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Clcn1Q64347 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Clcn1Q64347 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Clcn1Q64347 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Clcn1Q64347 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Clcn1Q64347 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Clcn1Q64347 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.83■□□□□ 0.77
Clcn1Q64347 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Clcn1Q64347 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Clcn1Q64347 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Clcn1Q64347 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Clcn1Q64347 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC19.83■□□□□ 0.77
Clcn1Q64347 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC19.83■□□□□ 0.77
Clcn1Q64347 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC19.83■□□□□ 0.77
Clcn1Q64347 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC19.83■□□□□ 0.77
Clcn1Q64347 AC122024.2-201ENSMUST00000220086 871 ntBASIC19.83■□□□□ 0.77
Clcn1Q64347 AC139382.1-201ENSMUST00000221402 498 ntBASIC19.83■□□□□ 0.77
Clcn1Q64347 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Clcn1Q64347 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Clcn1Q64347 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Clcn1Q64347 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms