Protein–RNA interactions for Protein: Q63870

Col7a1, Collagen alpha-1(VII) chain, mousemouse

Predictions only

Length 2,944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1Q63870 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col7a1Q63870 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC12.89□□□□□ -0.35
Col7a1Q63870 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col7a1Q63870 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col7a1Q63870 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col7a1Q63870 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col7a1Q63870 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col7a1Q63870 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Col7a1Q63870 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Col7a1Q63870 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Col7a1Q63870 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC12.89□□□□□ -0.35
Col7a1Q63870 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col7a1Q63870 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col7a1Q63870 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Col7a1Q63870 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC12.89□□□□□ -0.35
Col7a1Q63870 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC12.89□□□□□ -0.35
Col7a1Q63870 AC159896.2-201ENSMUST00000214753 269 ntBASIC12.89□□□□□ -0.35
Col7a1Q63870 AC154319.1-201ENSMUST00000216330 312 ntBASIC12.89□□□□□ -0.35
Col7a1Q63870 AL589735.1-201ENSMUST00000224353 270 ntBASIC12.89□□□□□ -0.35
Col7a1Q63870 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col7a1Q63870 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Col7a1Q63870 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Col7a1Q63870 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col7a1Q63870 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col7a1Q63870 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col7a1Q63870 Gm16570-201ENSMUST00000161951 436 ntBASIC12.89□□□□□ -0.35
Col7a1Q63870 Gm9002-201ENSMUST00000178437 499 ntBASIC12.89□□□□□ -0.35
Col7a1Q63870 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Col7a1Q63870 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC12.89□□□□□ -0.35
Col7a1Q63870 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Col7a1Q63870 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col7a1Q63870 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Col7a1Q63870 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col7a1Q63870 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col7a1Q63870 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col7a1Q63870 AC114008.2-201ENSMUST00000227699 1347 ntBASIC12.88□□□□□ -0.35
Col7a1Q63870 Gm8835-201ENSMUST00000173096 1169 ntBASIC12.88□□□□□ -0.35
Col7a1Q63870 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC12.88□□□□□ -0.35
Col7a1Q63870 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col7a1Q63870 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC12.88□□□□□ -0.35
Col7a1Q63870 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col7a1Q63870 Gm15823-201ENSMUST00000064305 670 ntBASIC12.88□□□□□ -0.35
Col7a1Q63870 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col7a1Q63870 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC12.88□□□□□ -0.35
Col7a1Q63870 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC12.88□□□□□ -0.35
Col7a1Q63870 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC12.88□□□□□ -0.35
Col7a1Q63870 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Col7a1Q63870 Gm15678-201ENSMUST00000117573 960 ntBASIC12.88□□□□□ -0.35
Col7a1Q63870 Gm4875-201ENSMUST00000118257 786 ntBASIC12.88□□□□□ -0.35
Col7a1Q63870 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col7a1Q63870 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC12.88□□□□□ -0.35
Col7a1Q63870 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC12.88□□□□□ -0.35
Col7a1Q63870 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC12.88□□□□□ -0.35
Col7a1Q63870 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Col7a1Q63870 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col7a1Q63870 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col7a1Q63870 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col7a1Q63870 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col7a1Q63870 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC12.87□□□□□ -0.35
Col7a1Q63870 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Col7a1Q63870 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC12.87□□□□□ -0.35
Col7a1Q63870 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col7a1Q63870 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC12.87□□□□□ -0.35
Col7a1Q63870 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Col7a1Q63870 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col7a1Q63870 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Col7a1Q63870 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col7a1Q63870 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Col7a1Q63870 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col7a1Q63870 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col7a1Q63870 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Col7a1Q63870 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC12.87□□□□□ -0.35
Col7a1Q63870 Gm12091-201ENSMUST00000146791 830 ntBASIC12.87□□□□□ -0.35
Col7a1Q63870 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Col7a1Q63870 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Col7a1Q63870 Mir7070-201ENSMUST00000183657 86 ntBASIC12.87□□□□□ -0.35
Col7a1Q63870 Gm27892-201ENSMUST00000185017 106 ntBASIC12.87□□□□□ -0.35
Col7a1Q63870 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col7a1Q63870 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Col7a1Q63870 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col7a1Q63870 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Col7a1Q63870 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Col7a1Q63870 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col7a1Q63870 Gm42853-201ENSMUST00000201273 1387 ntBASIC12.87□□□□□ -0.35
Col7a1Q63870 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Col7a1Q63870 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col7a1Q63870 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC12.86□□□□□ -0.35
Col7a1Q63870 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC12.86□□□□□ -0.35
Col7a1Q63870 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
Col7a1Q63870 Gm9719-201ENSMUST00000162765 543 ntBASIC12.86□□□□□ -0.35
Col7a1Q63870 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col7a1Q63870 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col7a1Q63870 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Col7a1Q63870 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Col7a1Q63870 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC12.86□□□□□ -0.35
Col7a1Q63870 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Col7a1Q63870 Gm18624-201ENSMUST00000220966 658 ntBASIC12.86□□□□□ -0.35
Col7a1Q63870 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col7a1Q63870 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC12.86□□□□□ -0.35
Col7a1Q63870 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms