Protein–RNA interactions for Protein: Q63829

Commd3, COMM domain-containing protein 3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Commd3Q63829 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Commd3Q63829 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Commd3Q63829 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Commd3Q63829 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Commd3Q63829 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC13.16□□□□□ -0.3
Commd3Q63829 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Commd3Q63829 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Commd3Q63829 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Commd3Q63829 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Commd3Q63829 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Commd3Q63829 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Commd3Q63829 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Commd3Q63829 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Commd3Q63829 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Commd3Q63829 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Commd3Q63829 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC13.16□□□□□ -0.3
Commd3Q63829 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Commd3Q63829 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Commd3Q63829 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Commd3Q63829 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC13.16□□□□□ -0.3
Commd3Q63829 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Commd3Q63829 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Commd3Q63829 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Commd3Q63829 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Commd3Q63829 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Commd3Q63829 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Commd3Q63829 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Commd3Q63829 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC13.16□□□□□ -0.3
Commd3Q63829 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Commd3Q63829 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Commd3Q63829 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Commd3Q63829 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Commd3Q63829 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Commd3Q63829 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Commd3Q63829 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Commd3Q63829 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC13.15□□□□□ -0.3
Commd3Q63829 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Commd3Q63829 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Commd3Q63829 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Commd3Q63829 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Commd3Q63829 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Commd3Q63829 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Commd3Q63829 Gm14464-201ENSMUST00000119658 1254 ntBASIC13.15□□□□□ -0.3
Commd3Q63829 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Commd3Q63829 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC13.15□□□□□ -0.3
Commd3Q63829 Gm3807-201ENSMUST00000193520 1168 ntBASIC13.15□□□□□ -0.3
Commd3Q63829 Gm43183-201ENSMUST00000200632 547 ntBASIC13.15□□□□□ -0.3
Commd3Q63829 AC120002.2-201ENSMUST00000220205 773 ntBASIC13.15□□□□□ -0.3
Commd3Q63829 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Commd3Q63829 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Commd3Q63829 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Commd3Q63829 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Commd3Q63829 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Commd3Q63829 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Commd3Q63829 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Commd3Q63829 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Commd3Q63829 AC148324.1-201ENSMUST00000219034 4240 ntBASIC13.15□□□□□ -0.31
Commd3Q63829 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Commd3Q63829 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC13.14□□□□□ -0.31
Commd3Q63829 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Commd3Q63829 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Commd3Q63829 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Commd3Q63829 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Commd3Q63829 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC13.14□□□□□ -0.31
Commd3Q63829 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Commd3Q63829 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Commd3Q63829 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Commd3Q63829 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Commd3Q63829 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Commd3Q63829 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Commd3Q63829 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Commd3Q63829 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC13.14□□□□□ -0.31
Commd3Q63829 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC13.14□□□□□ -0.31
Commd3Q63829 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Commd3Q63829 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Commd3Q63829 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Commd3Q63829 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Commd3Q63829 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC13.14□□□□□ -0.31
Commd3Q63829 AC174678.1-201ENSMUST00000228007 2749 ntBASIC13.14□□□□□ -0.31
Commd3Q63829 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Commd3Q63829 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Commd3Q63829 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Commd3Q63829 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Commd3Q63829 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Commd3Q63829 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Commd3Q63829 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Commd3Q63829 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC13.13□□□□□ -0.31
Commd3Q63829 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Commd3Q63829 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Commd3Q63829 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Commd3Q63829 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Commd3Q63829 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Commd3Q63829 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Commd3Q63829 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Commd3Q63829 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC13.13□□□□□ -0.31
Commd3Q63829 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Commd3Q63829 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Commd3Q63829 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Commd3Q63829 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Commd3Q63829 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms