Protein–RNA interactions for Protein: Q61818

Rai1, Retinoic acid-induced protein 1, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rai1Q61818 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC15.08■□□□□ 0
Rai1Q61818 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC15.08■□□□□ 0
Rai1Q61818 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Rai1Q61818 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Rai1Q61818 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Rai1Q61818 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rai1Q61818 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
Rai1Q61818 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rai1Q61818 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rai1Q61818 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rai1Q61818 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rai1Q61818 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC15.07■□□□□ 0
Rai1Q61818 Gm10253-201ENSMUST00000194270 940 ntBASIC15.07■□□□□ 0
Rai1Q61818 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rai1Q61818 Gm44729-201ENSMUST00000206759 2052 ntBASIC15.07■□□□□ 0
Rai1Q61818 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
Rai1Q61818 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC15.07■□□□□ 0
Rai1Q61818 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Rai1Q61818 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rai1Q61818 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC15.07■□□□□ 0
Rai1Q61818 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC15.06■□□□□ 0
Rai1Q61818 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Rai1Q61818 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC15.06■□□□□ 0
Rai1Q61818 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC15.06■□□□□ 0
Rai1Q61818 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC15.06■□□□□ 0
Rai1Q61818 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rai1Q61818 AC130669.1-201ENSMUST00000228537 1672 ntBASIC15.06■□□□□ 0
Rai1Q61818 Gm25287-201ENSMUST00000103846 110 ntBASIC15.06■□□□□ 0
Rai1Q61818 Gm22918-201ENSMUST00000103855 110 ntBASIC15.06■□□□□ 0
Rai1Q61818 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Rai1Q61818 Gm12428-201ENSMUST00000119844 727 ntBASIC15.06■□□□□ 0
Rai1Q61818 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC15.06■□□□□ 0
Rai1Q61818 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC15.06■□□□□ 0
Rai1Q61818 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rai1Q61818 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC15.06■□□□□ 0
Rai1Q61818 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Rai1Q61818 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC15.06■□□□□ 0
Rai1Q61818 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rai1Q61818 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rai1Q61818 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC15.06■□□□□ 0
Rai1Q61818 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC15.06■□□□□ 0
Rai1Q61818 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rai1Q61818 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rai1Q61818 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rai1Q61818 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rai1Q61818 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rai1Q61818 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
Rai1Q61818 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC15.06■□□□□ 0
Rai1Q61818 Gm14722-201ENSMUST00000118943 689 ntBASIC15.06■□□□□ 0
Rai1Q61818 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC15.06■□□□□ 0
Rai1Q61818 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rai1Q61818 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Rai1Q61818 Gm7774-201ENSMUST00000200064 533 ntBASIC15.06■□□□□ 0
Rai1Q61818 AC166341.4-201ENSMUST00000220625 123 ntBASIC15.06■□□□□ 0
Rai1Q61818 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC15.06■□□□□ 0
Rai1Q61818 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Rai1Q61818 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Rai1Q61818 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC15.05■□□□□ 0
Rai1Q61818 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Rai1Q61818 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Rai1Q61818 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC15.05■□□□□ 0
Rai1Q61818 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Rai1Q61818 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rai1Q61818 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Rai1Q61818 Gm6018-201ENSMUST00000216090 1306 ntBASIC15.05■□□□□ -0
Rai1Q61818 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC15.05■□□□□ -0
Rai1Q61818 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC15.05■□□□□ -0
Rai1Q61818 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC15.05■□□□□ -0
Rai1Q61818 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC15.05■□□□□ -0
Rai1Q61818 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Rai1Q61818 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rai1Q61818 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC15.05■□□□□ -0
Rai1Q61818 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rai1Q61818 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rai1Q61818 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rai1Q61818 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC15.05■□□□□ -0
Rai1Q61818 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rai1Q61818 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC15.04■□□□□ -0
Rai1Q61818 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rai1Q61818 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rai1Q61818 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC15.04■□□□□ -0
Rai1Q61818 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC15.04■□□□□ -0
Rai1Q61818 AC131710.1-201ENSMUST00000228336 990 ntBASIC15.04■□□□□ -0
Rai1Q61818 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Rai1Q61818 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC15.04■□□□□ -0
Rai1Q61818 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rai1Q61818 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rai1Q61818 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rai1Q61818 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Rai1Q61818 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC15.04■□□□□ -0
Rai1Q61818 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rai1Q61818 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC15.03■□□□□ -0
Rai1Q61818 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
Rai1Q61818 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC15.03■□□□□ -0
Rai1Q61818 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rai1Q61818 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rai1Q61818 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Rai1Q61818 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC15.03■□□□□ -0
Rai1Q61818 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Rai1Q61818 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms