Protein–RNA interactions for Protein: Q61508

Ecm1, Extracellular matrix protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ecm1Q61508 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC17.35■□□□□ 0.37
Ecm1Q61508 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC17.35■□□□□ 0.37
Ecm1Q61508 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC17.35■□□□□ 0.37
Ecm1Q61508 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC17.35■□□□□ 0.37
Ecm1Q61508 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ecm1Q61508 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Ecm1Q61508 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ecm1Q61508 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC17.35■□□□□ 0.37
Ecm1Q61508 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC17.35■□□□□ 0.37
Ecm1Q61508 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC17.35■□□□□ 0.37
Ecm1Q61508 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ecm1Q61508 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ecm1Q61508 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ecm1Q61508 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ecm1Q61508 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ecm1Q61508 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ecm1Q61508 AC157650.3-201ENSMUST00000225058 1476 ntBASIC17.35■□□□□ 0.37
Ecm1Q61508 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Ecm1Q61508 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ecm1Q61508 Prkcz2-201ENSMUST00000206136 1756 ntBASIC17.35■□□□□ 0.37
Ecm1Q61508 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Ecm1Q61508 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ecm1Q61508 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ecm1Q61508 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Ecm1Q61508 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ecm1Q61508 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC17.35■□□□□ 0.37
Ecm1Q61508 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ecm1Q61508 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ecm1Q61508 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.34■□□□□ 0.37
Ecm1Q61508 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ecm1Q61508 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Ecm1Q61508 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC17.34■□□□□ 0.37
Ecm1Q61508 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Ecm1Q61508 Gm16198-201ENSMUST00000118766 670 ntBASIC17.34■□□□□ 0.37
Ecm1Q61508 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC17.34■□□□□ 0.37
Ecm1Q61508 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ecm1Q61508 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC17.34■□□□□ 0.37
Ecm1Q61508 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ecm1Q61508 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ecm1Q61508 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ecm1Q61508 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ecm1Q61508 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ecm1Q61508 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ecm1Q61508 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC17.34■□□□□ 0.37
Ecm1Q61508 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC17.34■□□□□ 0.37
Ecm1Q61508 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ecm1Q61508 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ecm1Q61508 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ecm1Q61508 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ecm1Q61508 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Ecm1Q61508 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ecm1Q61508 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ecm1Q61508 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Ecm1Q61508 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ecm1Q61508 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ecm1Q61508 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Ecm1Q61508 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Ecm1Q61508 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC17.34■□□□□ 0.37
Ecm1Q61508 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.34■□□□□ 0.37
Ecm1Q61508 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ecm1Q61508 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ecm1Q61508 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ecm1Q61508 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.33■□□□□ 0.37
Ecm1Q61508 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ecm1Q61508 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ecm1Q61508 Gm13410-201ENSMUST00000117058 1415 ntBASIC17.33■□□□□ 0.36
Ecm1Q61508 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ecm1Q61508 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ecm1Q61508 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ecm1Q61508 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC17.33■□□□□ 0.36
Ecm1Q61508 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ecm1Q61508 Gm14722-201ENSMUST00000118943 689 ntBASIC17.33■□□□□ 0.36
Ecm1Q61508 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ecm1Q61508 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC17.33■□□□□ 0.36
Ecm1Q61508 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Ecm1Q61508 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ecm1Q61508 AC140397.2-201ENSMUST00000224213 834 ntBASIC17.33■□□□□ 0.36
Ecm1Q61508 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ecm1Q61508 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ecm1Q61508 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Ecm1Q61508 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ecm1Q61508 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ecm1Q61508 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ecm1Q61508 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ecm1Q61508 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Ecm1Q61508 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ecm1Q61508 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ecm1Q61508 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ecm1Q61508 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Ecm1Q61508 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ecm1Q61508 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ecm1Q61508 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ecm1Q61508 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ecm1Q61508 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ecm1Q61508 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ecm1Q61508 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ecm1Q61508 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ecm1Q61508 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ecm1Q61508 Gm43125-201ENSMUST00000201724 730 ntBASIC17.32■□□□□ 0.36
Ecm1Q61508 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms