Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC15.43■□□□□ 0.06
Col12a1Q60847 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC15.43■□□□□ 0.06
Col12a1Q60847 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC15.43■□□□□ 0.06
Col12a1Q60847 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Col12a1Q60847 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Col12a1Q60847 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC15.43■□□□□ 0.06
Col12a1Q60847 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Col12a1Q60847 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Col12a1Q60847 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Col12a1Q60847 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Col12a1Q60847 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Col12a1Q60847 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Col12a1Q60847 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Col12a1Q60847 Gm27838-201ENSMUST00000184829 128 ntBASIC15.43■□□□□ 0.06
Col12a1Q60847 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC15.43■□□□□ 0.06
Col12a1Q60847 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
Col12a1Q60847 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC15.43■□□□□ 0.06
Col12a1Q60847 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Col12a1Q60847 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
Col12a1Q60847 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Col12a1Q60847 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC15.43■□□□□ 0.06
Col12a1Q60847 Gm12859-201ENSMUST00000117834 427 ntBASIC15.43■□□□□ 0.06
Col12a1Q60847 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC15.43■□□□□ 0.06
Col12a1Q60847 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Col12a1Q60847 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC15.43■□□□□ 0.06
Col12a1Q60847 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Col12a1Q60847 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Col12a1Q60847 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col12a1Q60847 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col12a1Q60847 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col12a1Q60847 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col12a1Q60847 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col12a1Q60847 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Col12a1Q60847 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Col12a1Q60847 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC15.42■□□□□ 0.06
Col12a1Q60847 Gm19164-201ENSMUST00000210667 640 ntBASIC15.42■□□□□ 0.06
Col12a1Q60847 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col12a1Q60847 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Col12a1Q60847 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Col12a1Q60847 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Col12a1Q60847 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC15.42■□□□□ 0.06
Col12a1Q60847 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col12a1Q60847 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
Col12a1Q60847 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col12a1Q60847 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col12a1Q60847 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC15.42■□□□□ 0.06
Col12a1Q60847 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col12a1Q60847 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col12a1Q60847 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Col12a1Q60847 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col12a1Q60847 AC131068.2-201ENSMUST00000226175 1453 ntBASIC15.42■□□□□ 0.06
Col12a1Q60847 Haglr-201ENSMUST00000100000 2085 ntBASIC15.42■□□□□ 0.06
Col12a1Q60847 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Col12a1Q60847 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
Col12a1Q60847 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Col12a1Q60847 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Col12a1Q60847 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Col12a1Q60847 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Col12a1Q60847 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC15.41■□□□□ 0.06
Col12a1Q60847 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC15.41■□□□□ 0.06
Col12a1Q60847 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC15.41■□□□□ 0.06
Col12a1Q60847 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC15.41■□□□□ 0.06
Col12a1Q60847 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Col12a1Q60847 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC15.41■□□□□ 0.06
Col12a1Q60847 AC158538.2-201ENSMUST00000225455 906 ntBASIC15.41■□□□□ 0.06
Col12a1Q60847 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Col12a1Q60847 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
Col12a1Q60847 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Col12a1Q60847 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Col12a1Q60847 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Col12a1Q60847 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Col12a1Q60847 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Col12a1Q60847 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Col12a1Q60847 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Col12a1Q60847 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Col12a1Q60847 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC15.41■□□□□ 0.06
Col12a1Q60847 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Col12a1Q60847 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Col12a1Q60847 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Col12a1Q60847 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Col12a1Q60847 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC15.4■□□□□ 0.06
Col12a1Q60847 Gm29667-201ENSMUST00000190817 490 ntBASIC15.4■□□□□ 0.06
Col12a1Q60847 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC15.4■□□□□ 0.06
Col12a1Q60847 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Col12a1Q60847 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC15.4■□□□□ 0.06
Col12a1Q60847 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Col12a1Q60847 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Col12a1Q60847 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Col12a1Q60847 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Col12a1Q60847 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Col12a1Q60847 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Col12a1Q60847 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Col12a1Q60847 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Col12a1Q60847 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Col12a1Q60847 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Col12a1Q60847 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Col12a1Q60847 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col12a1Q60847 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Col12a1Q60847 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Col12a1Q60847 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC15.39■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms