Protein–RNA interactions for Protein: Q5R1H9

Trav7d-4, T cell receptor alpha variable 7D-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-4Q5R1H9 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav7d-4Q5R1H9 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Trav7d-4Q5R1H9 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav7d-4Q5R1H9 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav7d-4Q5R1H9 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav7d-4Q5R1H9 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Trav7d-4Q5R1H9 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC12.05□□□□□ -0.48
Trav7d-4Q5R1H9 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav7d-4Q5R1H9 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav7d-4Q5R1H9 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav7d-4Q5R1H9 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav7d-4Q5R1H9 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC12.04□□□□□ -0.48
Trav7d-4Q5R1H9 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav7d-4Q5R1H9 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav7d-4Q5R1H9 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC12.04□□□□□ -0.48
Trav7d-4Q5R1H9 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav7d-4Q5R1H9 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav7d-4Q5R1H9 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC12.04□□□□□ -0.48
Trav7d-4Q5R1H9 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav7d-4Q5R1H9 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav7d-4Q5R1H9 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav7d-4Q5R1H9 Gm13148-201ENSMUST00000118892 745 ntBASIC12.04□□□□□ -0.48
Trav7d-4Q5R1H9 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC12.04□□□□□ -0.48
Trav7d-4Q5R1H9 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Trav7d-4Q5R1H9 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Trav7d-4Q5R1H9 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav7d-4Q5R1H9 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC12.04□□□□□ -0.48
Trav7d-4Q5R1H9 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Trav7d-4Q5R1H9 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav7d-4Q5R1H9 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav7d-4Q5R1H9 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav7d-4Q5R1H9 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Trav7d-4Q5R1H9 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav7d-4Q5R1H9 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav7d-4Q5R1H9 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav7d-4Q5R1H9 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav7d-4Q5R1H9 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC12.04□□□□□ -0.48
Trav7d-4Q5R1H9 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC12.04□□□□□ -0.48
Trav7d-4Q5R1H9 Gm10710-201ENSMUST00000047876 3971 ntBASIC12.03□□□□□ -0.48
Trav7d-4Q5R1H9 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav7d-4Q5R1H9 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav7d-4Q5R1H9 Dio3-201ENSMUST00000097228 1449 ntBASIC12.03□□□□□ -0.48
Trav7d-4Q5R1H9 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav7d-4Q5R1H9 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav7d-4Q5R1H9 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Trav7d-4Q5R1H9 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Trav7d-4Q5R1H9 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav7d-4Q5R1H9 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav7d-4Q5R1H9 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav7d-4Q5R1H9 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav7d-4Q5R1H9 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Trav7d-4Q5R1H9 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC12.03□□□□□ -0.48
Trav7d-4Q5R1H9 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav7d-4Q5R1H9 Gm36967-201ENSMUST00000193814 266 ntBASIC12.03□□□□□ -0.48
Trav7d-4Q5R1H9 Gm42642-201ENSMUST00000200683 355 ntBASIC12.03□□□□□ -0.48
Trav7d-4Q5R1H9 Gm44672-201ENSMUST00000206944 1098 ntBASIC12.03□□□□□ -0.48
Trav7d-4Q5R1H9 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC12.03□□□□□ -0.48
Trav7d-4Q5R1H9 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC12.03□□□□□ -0.48
Trav7d-4Q5R1H9 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Trav7d-4Q5R1H9 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav7d-4Q5R1H9 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav7d-4Q5R1H9 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav7d-4Q5R1H9 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav7d-4Q5R1H9 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Trav7d-4Q5R1H9 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Trav7d-4Q5R1H9 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav7d-4Q5R1H9 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Trav7d-4Q5R1H9 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav7d-4Q5R1H9 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav7d-4Q5R1H9 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Trav7d-4Q5R1H9 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Trav7d-4Q5R1H9 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav7d-4Q5R1H9 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Trav7d-4Q5R1H9 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Trav7d-4Q5R1H9 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav7d-4Q5R1H9 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav7d-4Q5R1H9 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav7d-4Q5R1H9 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC12.02□□□□□ -0.49
Trav7d-4Q5R1H9 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Trav7d-4Q5R1H9 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav7d-4Q5R1H9 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav7d-4Q5R1H9 Gm13158-201ENSMUST00000122007 736 ntBASIC12.02□□□□□ -0.49
Trav7d-4Q5R1H9 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav7d-4Q5R1H9 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC12.02□□□□□ -0.49
Trav7d-4Q5R1H9 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav7d-4Q5R1H9 AC120002.2-201ENSMUST00000220205 773 ntBASIC12.02□□□□□ -0.49
Trav7d-4Q5R1H9 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Trav7d-4Q5R1H9 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Trav7d-4Q5R1H9 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav7d-4Q5R1H9 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav7d-4Q5R1H9 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav7d-4Q5R1H9 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav7d-4Q5R1H9 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav7d-4Q5R1H9 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav7d-4Q5R1H9 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav7d-4Q5R1H9 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav7d-4Q5R1H9 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav7d-4Q5R1H9 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Trav7d-4Q5R1H9 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav7d-4Q5R1H9 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms