Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav3-3Q5R1C3 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Trav3-3Q5R1C3 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC11.88□□□□□ -0.51
Trav3-3Q5R1C3 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav3-3Q5R1C3 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav3-3Q5R1C3 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav3-3Q5R1C3 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Trav3-3Q5R1C3 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC11.87□□□□□ -0.51
Trav3-3Q5R1C3 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav3-3Q5R1C3 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav3-3Q5R1C3 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav3-3Q5R1C3 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav3-3Q5R1C3 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav3-3Q5R1C3 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav3-3Q5R1C3 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav3-3Q5R1C3 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav3-3Q5R1C3 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav3-3Q5R1C3 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav3-3Q5R1C3 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Trav3-3Q5R1C3 Gm3807-201ENSMUST00000193520 1168 ntBASIC11.87□□□□□ -0.51
Trav3-3Q5R1C3 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC11.87□□□□□ -0.51
Trav3-3Q5R1C3 Gm4968-201ENSMUST00000071458 858 ntBASIC11.87□□□□□ -0.51
Trav3-3Q5R1C3 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav3-3Q5R1C3 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav3-3Q5R1C3 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav3-3Q5R1C3 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav3-3Q5R1C3 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC11.87□□□□□ -0.51
Trav3-3Q5R1C3 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav3-3Q5R1C3 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav3-3Q5R1C3 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav3-3Q5R1C3 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav3-3Q5R1C3 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC11.87□□□□□ -0.51
Trav3-3Q5R1C3 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav3-3Q5R1C3 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC11.86□□□□□ -0.51
Trav3-3Q5R1C3 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav3-3Q5R1C3 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav3-3Q5R1C3 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav3-3Q5R1C3 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Trav3-3Q5R1C3 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav3-3Q5R1C3 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav3-3Q5R1C3 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav3-3Q5R1C3 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav3-3Q5R1C3 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav3-3Q5R1C3 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Trav3-3Q5R1C3 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav3-3Q5R1C3 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Trav3-3Q5R1C3 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC11.86□□□□□ -0.51
Trav3-3Q5R1C3 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC11.86□□□□□ -0.51
Trav3-3Q5R1C3 Gm26571-201ENSMUST00000181399 666 ntBASIC11.86□□□□□ -0.51
Trav3-3Q5R1C3 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Trav3-3Q5R1C3 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav3-3Q5R1C3 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav3-3Q5R1C3 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav3-3Q5R1C3 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav3-3Q5R1C3 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav3-3Q5R1C3 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav3-3Q5R1C3 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC11.86□□□□□ -0.51
Trav3-3Q5R1C3 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav3-3Q5R1C3 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav3-3Q5R1C3 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav3-3Q5R1C3 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav3-3Q5R1C3 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC11.86□□□□□ -0.51
Trav3-3Q5R1C3 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav3-3Q5R1C3 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav3-3Q5R1C3 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav3-3Q5R1C3 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Trav3-3Q5R1C3 Mypopos-202ENSMUST00000205975 2321 ntBASIC11.86□□□□□ -0.51
Trav3-3Q5R1C3 Kcnk16-202ENSMUST00000225596 2127 ntBASIC11.86□□□□□ -0.51
Trav3-3Q5R1C3 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav3-3Q5R1C3 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav3-3Q5R1C3 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav3-3Q5R1C3 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC11.85□□□□□ -0.51
Trav3-3Q5R1C3 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav3-3Q5R1C3 Gm12620-201ENSMUST00000119791 1986 ntBASIC11.85□□□□□ -0.51
Trav3-3Q5R1C3 Gm12612-201ENSMUST00000140182 1986 ntBASIC11.85□□□□□ -0.51
Trav3-3Q5R1C3 AC153366.2-201ENSMUST00000219461 1984 ntBASIC11.85□□□□□ -0.51
Trav3-3Q5R1C3 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav3-3Q5R1C3 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav3-3Q5R1C3 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav3-3Q5R1C3 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav3-3Q5R1C3 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav3-3Q5R1C3 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav3-3Q5R1C3 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav3-3Q5R1C3 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav3-3Q5R1C3 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC11.85□□□□□ -0.51
Trav3-3Q5R1C3 Gm5408-201ENSMUST00000197998 747 ntBASIC11.85□□□□□ -0.51
Trav3-3Q5R1C3 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC11.85□□□□□ -0.51
Trav3-3Q5R1C3 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC11.85□□□□□ -0.51
Trav3-3Q5R1C3 AC122769.4-201ENSMUST00000228166 901 ntBASIC11.85□□□□□ -0.51
Trav3-3Q5R1C3 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav3-3Q5R1C3 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Trav3-3Q5R1C3 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Trav3-3Q5R1C3 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav3-3Q5R1C3 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav3-3Q5R1C3 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Trav3-3Q5R1C3 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav3-3Q5R1C3 Gm9947-201ENSMUST00000067599 2920 ntBASIC11.85□□□□□ -0.51
Trav3-3Q5R1C3 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC11.85□□□□□ -0.51
Trav3-3Q5R1C3 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav3-3Q5R1C3 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms