Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Gm11860-201ENSMUST00000122346 1010 ntBASIC15.61■□□□□ 0.09
Scn2bQ56A07 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC15.61■□□□□ 0.09
Scn2bQ56A07 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
Scn2bQ56A07 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC15.61■□□□□ 0.09
Scn2bQ56A07 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Scn2bQ56A07 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Scn2bQ56A07 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC15.61■□□□□ 0.09
Scn2bQ56A07 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Scn2bQ56A07 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Scn2bQ56A07 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Scn2bQ56A07 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Scn2bQ56A07 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Scn2bQ56A07 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Scn2bQ56A07 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Scn2bQ56A07 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Scn2bQ56A07 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Scn2bQ56A07 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC15.61■□□□□ 0.09
Scn2bQ56A07 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Scn2bQ56A07 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Scn2bQ56A07 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Scn2bQ56A07 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Scn2bQ56A07 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Scn2bQ56A07 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Scn2bQ56A07 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Scn2bQ56A07 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Scn2bQ56A07 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Scn2bQ56A07 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Scn2bQ56A07 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Scn2bQ56A07 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Scn2bQ56A07 Gm14859-201ENSMUST00000117752 357 ntBASIC15.6■□□□□ 0.09
Scn2bQ56A07 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC15.6■□□□□ 0.09
Scn2bQ56A07 Gm29518-201ENSMUST00000190858 372 ntBASIC15.6■□□□□ 0.09
Scn2bQ56A07 Gm33142-201ENSMUST00000193913 867 ntBASIC15.6■□□□□ 0.09
Scn2bQ56A07 Gm17808-201ENSMUST00000200859 894 ntBASIC15.6■□□□□ 0.09
Scn2bQ56A07 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC15.6■□□□□ 0.09
Scn2bQ56A07 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Scn2bQ56A07 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Scn2bQ56A07 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC15.6■□□□□ 0.09
Scn2bQ56A07 BC037039-201ENSMUST00000192003 2205 ntBASIC15.6■□□□□ 0.09
Scn2bQ56A07 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC15.6■□□□□ 0.09
Scn2bQ56A07 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Scn2bQ56A07 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Scn2bQ56A07 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Scn2bQ56A07 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
Scn2bQ56A07 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC15.59■□□□□ 0.09
Scn2bQ56A07 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC15.59■□□□□ 0.09
Scn2bQ56A07 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Scn2bQ56A07 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Scn2bQ56A07 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Scn2bQ56A07 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Scn2bQ56A07 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC15.59■□□□□ 0.09
Scn2bQ56A07 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC15.59■□□□□ 0.09
Scn2bQ56A07 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Scn2bQ56A07 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Scn2bQ56A07 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Scn2bQ56A07 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC15.59■□□□□ 0.09
Scn2bQ56A07 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Scn2bQ56A07 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Scn2bQ56A07 Gm11950-201ENSMUST00000121615 838 ntBASIC15.59■□□□□ 0.09
Scn2bQ56A07 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC15.59■□□□□ 0.09
Scn2bQ56A07 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Scn2bQ56A07 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Scn2bQ56A07 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC15.59■□□□□ 0.09
Scn2bQ56A07 AC130671.1-201ENSMUST00000227384 1237 ntBASIC15.59■□□□□ 0.09
Scn2bQ56A07 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Scn2bQ56A07 Gm7367-201ENSMUST00000057611 492 ntBASIC15.59■□□□□ 0.09
Scn2bQ56A07 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Scn2bQ56A07 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Scn2bQ56A07 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Scn2bQ56A07 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Scn2bQ56A07 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Scn2bQ56A07 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Scn2bQ56A07 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Scn2bQ56A07 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Scn2bQ56A07 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Scn2bQ56A07 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Scn2bQ56A07 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC15.58■□□□□ 0.09
Scn2bQ56A07 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Scn2bQ56A07 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Scn2bQ56A07 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Scn2bQ56A07 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Scn2bQ56A07 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Scn2bQ56A07 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.09
Scn2bQ56A07 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Scn2bQ56A07 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Scn2bQ56A07 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Scn2bQ56A07 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Scn2bQ56A07 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Scn2bQ56A07 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC15.58■□□□□ 0.08
Scn2bQ56A07 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Scn2bQ56A07 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC15.58■□□□□ 0.08
Scn2bQ56A07 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Scn2bQ56A07 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Scn2bQ56A07 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Scn2bQ56A07 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Scn2bQ56A07 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Scn2bQ56A07 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Scn2bQ56A07 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Scn2bQ56A07 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Scn2bQ56A07 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms