Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Shank3Q4ACU6 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Shank3Q4ACU6 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Shank3Q4ACU6 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Shank3Q4ACU6 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Shank3Q4ACU6 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Shank3Q4ACU6 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Shank3Q4ACU6 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Shank3Q4ACU6 Gm45293-201ENSMUST00000209754 1812 ntBASIC19.42■□□□□ 0.7
Shank3Q4ACU6 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Shank3Q4ACU6 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Shank3Q4ACU6 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC19.41■□□□□ 0.7
Shank3Q4ACU6 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC19.41■□□□□ 0.7
Shank3Q4ACU6 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Shank3Q4ACU6 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Shank3Q4ACU6 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Shank3Q4ACU6 Gm14719-201ENSMUST00000121891 340 ntBASIC19.41■□□□□ 0.7
Shank3Q4ACU6 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Shank3Q4ACU6 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC19.41■□□□□ 0.7
Shank3Q4ACU6 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Shank3Q4ACU6 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Shank3Q4ACU6 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Shank3Q4ACU6 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Shank3Q4ACU6 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Shank3Q4ACU6 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Shank3Q4ACU6 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Shank3Q4ACU6 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Shank3Q4ACU6 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Shank3Q4ACU6 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC19.4■□□□□ 0.7
Shank3Q4ACU6 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Shank3Q4ACU6 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Shank3Q4ACU6 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Shank3Q4ACU6 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC19.4■□□□□ 0.7
Shank3Q4ACU6 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Shank3Q4ACU6 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC19.4■□□□□ 0.7
Shank3Q4ACU6 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Shank3Q4ACU6 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Shank3Q4ACU6 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Shank3Q4ACU6 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Shank3Q4ACU6 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Shank3Q4ACU6 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Shank3Q4ACU6 Gm26596-201ENSMUST00000180464 2655 ntBASIC19.4■□□□□ 0.7
Shank3Q4ACU6 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC19.39■□□□□ 0.7
Shank3Q4ACU6 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC19.39■□□□□ 0.7
Shank3Q4ACU6 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC19.39■□□□□ 0.7
Shank3Q4ACU6 Gm7730-201ENSMUST00000212486 454 ntBASIC19.39■□□□□ 0.7
Shank3Q4ACU6 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC19.39■□□□□ 0.7
Shank3Q4ACU6 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Shank3Q4ACU6 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC19.39■□□□□ 0.69
Shank3Q4ACU6 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Shank3Q4ACU6 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Shank3Q4ACU6 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Shank3Q4ACU6 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Shank3Q4ACU6 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Shank3Q4ACU6 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC19.39■□□□□ 0.69
Shank3Q4ACU6 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC19.39■□□□□ 0.69
Shank3Q4ACU6 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Shank3Q4ACU6 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
Shank3Q4ACU6 AC132863.2-201ENSMUST00000226643 799 ntBASIC19.39■□□□□ 0.69
Shank3Q4ACU6 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC19.39■□□□□ 0.69
Shank3Q4ACU6 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC19.39■□□□□ 0.69
Shank3Q4ACU6 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Shank3Q4ACU6 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Shank3Q4ACU6 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Shank3Q4ACU6 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Shank3Q4ACU6 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Shank3Q4ACU6 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Shank3Q4ACU6 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Shank3Q4ACU6 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Shank3Q4ACU6 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Shank3Q4ACU6 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Shank3Q4ACU6 Gm13453-201ENSMUST00000118708 357 ntBASIC19.38■□□□□ 0.69
Shank3Q4ACU6 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Shank3Q4ACU6 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Shank3Q4ACU6 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC19.38■□□□□ 0.69
Shank3Q4ACU6 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC19.38■□□□□ 0.69
Shank3Q4ACU6 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Shank3Q4ACU6 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Shank3Q4ACU6 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC19.37■□□□□ 0.69
Shank3Q4ACU6 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
Shank3Q4ACU6 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Shank3Q4ACU6 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC19.37■□□□□ 0.69
Shank3Q4ACU6 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Shank3Q4ACU6 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC19.37■□□□□ 0.69
Shank3Q4ACU6 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Shank3Q4ACU6 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Shank3Q4ACU6 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Shank3Q4ACU6 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Shank3Q4ACU6 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC19.37■□□□□ 0.69
Shank3Q4ACU6 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC19.37■□□□□ 0.69
Shank3Q4ACU6 Gm15487-201ENSMUST00000122373 465 ntBASIC19.37■□□□□ 0.69
Shank3Q4ACU6 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Shank3Q4ACU6 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Shank3Q4ACU6 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Shank3Q4ACU6 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC19.36■□□□□ 0.69
Shank3Q4ACU6 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC19.36■□□□□ 0.69
Shank3Q4ACU6 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Shank3Q4ACU6 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Shank3Q4ACU6 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Shank3Q4ACU6 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms