Protein–RNA interactions for Protein: Q3UV31

Rnf223, RING finger protein 223, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf223Q3UV31 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rnf223Q3UV31 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC15.25■□□□□ 0.03
Rnf223Q3UV31 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rnf223Q3UV31 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rnf223Q3UV31 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rnf223Q3UV31 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC15.25■□□□□ 0.03
Rnf223Q3UV31 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Rnf223Q3UV31 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Rnf223Q3UV31 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rnf223Q3UV31 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rnf223Q3UV31 Gm11779-201ENSMUST00000118541 368 ntBASIC15.25■□□□□ 0.03
Rnf223Q3UV31 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC15.25■□□□□ 0.03
Rnf223Q3UV31 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC15.25■□□□□ 0.03
Rnf223Q3UV31 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rnf223Q3UV31 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC15.25■□□□□ 0.03
Rnf223Q3UV31 Gm42670-201ENSMUST00000201816 1292 ntBASIC15.25■□□□□ 0.03
Rnf223Q3UV31 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC15.25■□□□□ 0.03
Rnf223Q3UV31 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rnf223Q3UV31 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rnf223Q3UV31 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rnf223Q3UV31 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rnf223Q3UV31 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rnf223Q3UV31 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC15.25■□□□□ 0.03
Rnf223Q3UV31 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rnf223Q3UV31 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Rnf223Q3UV31 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rnf223Q3UV31 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC15.25■□□□□ 0.03
Rnf223Q3UV31 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rnf223Q3UV31 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rnf223Q3UV31 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rnf223Q3UV31 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rnf223Q3UV31 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rnf223Q3UV31 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rnf223Q3UV31 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rnf223Q3UV31 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rnf223Q3UV31 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rnf223Q3UV31 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC15.24■□□□□ 0.03
Rnf223Q3UV31 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rnf223Q3UV31 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rnf223Q3UV31 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rnf223Q3UV31 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rnf223Q3UV31 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Rnf223Q3UV31 Crls1-204ENSMUST00000124836 1267 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rnf223Q3UV31 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rnf223Q3UV31 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Rnf223Q3UV31 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC15.24■□□□□ 0.03
Rnf223Q3UV31 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rnf223Q3UV31 Gm43332-201ENSMUST00000202511 1044 ntBASIC15.24■□□□□ 0.03
Rnf223Q3UV31 AC158538.2-201ENSMUST00000225455 906 ntBASIC15.24■□□□□ 0.03
Rnf223Q3UV31 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rnf223Q3UV31 AC147366.1-201ENSMUST00000227671 852 ntBASIC15.24■□□□□ 0.03
Rnf223Q3UV31 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rnf223Q3UV31 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rnf223Q3UV31 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rnf223Q3UV31 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Rnf223Q3UV31 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rnf223Q3UV31 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rnf223Q3UV31 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rnf223Q3UV31 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rnf223Q3UV31 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rnf223Q3UV31 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rnf223Q3UV31 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rnf223Q3UV31 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rnf223Q3UV31 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rnf223Q3UV31 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC15.23■□□□□ 0.03
Rnf223Q3UV31 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Rnf223Q3UV31 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rnf223Q3UV31 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rnf223Q3UV31 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rnf223Q3UV31 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC15.23■□□□□ 0.03
Rnf223Q3UV31 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rnf223Q3UV31 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Rnf223Q3UV31 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Rnf223Q3UV31 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC15.23■□□□□ 0.03
Rnf223Q3UV31 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rnf223Q3UV31 Gm8000-201ENSMUST00000188378 592 ntBASIC15.23■□□□□ 0.03
Rnf223Q3UV31 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC15.23■□□□□ 0.03
Rnf223Q3UV31 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rnf223Q3UV31 AC159093.1-201ENSMUST00000227779 380 ntBASIC15.23■□□□□ 0.03
Rnf223Q3UV31 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Rnf223Q3UV31 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rnf223Q3UV31 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rnf223Q3UV31 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Rnf223Q3UV31 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Rnf223Q3UV31 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rnf223Q3UV31 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rnf223Q3UV31 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rnf223Q3UV31 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Rnf223Q3UV31 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rnf223Q3UV31 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf223Q3UV31 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
Rnf223Q3UV31 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf223Q3UV31 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Rnf223Q3UV31 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Rnf223Q3UV31 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf223Q3UV31 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf223Q3UV31 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Rnf223Q3UV31 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf223Q3UV31 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf223Q3UV31 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms