Protein–RNA interactions for Protein: Q3ULM6

Uspl1, SUMO-specific isopeptidase USPL1, mousemouse

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uspl1Q3ULM6 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Uspl1Q3ULM6 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Uspl1Q3ULM6 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
Uspl1Q3ULM6 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Uspl1Q3ULM6 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Uspl1Q3ULM6 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Uspl1Q3ULM6 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Uspl1Q3ULM6 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Uspl1Q3ULM6 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Uspl1Q3ULM6 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Uspl1Q3ULM6 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Uspl1Q3ULM6 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Uspl1Q3ULM6 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC20.27■□□□□ 0.83
Uspl1Q3ULM6 Gm37500-201ENSMUST00000192059 1443 ntBASIC20.27■□□□□ 0.83
Uspl1Q3ULM6 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Uspl1Q3ULM6 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Uspl1Q3ULM6 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Uspl1Q3ULM6 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Uspl1Q3ULM6 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Uspl1Q3ULM6 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC20.26■□□□□ 0.83
Uspl1Q3ULM6 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Uspl1Q3ULM6 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC20.26■□□□□ 0.83
Uspl1Q3ULM6 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Uspl1Q3ULM6 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC20.26■□□□□ 0.83
Uspl1Q3ULM6 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC20.26■□□□□ 0.83
Uspl1Q3ULM6 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC20.26■□□□□ 0.83
Uspl1Q3ULM6 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Uspl1Q3ULM6 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Uspl1Q3ULM6 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Uspl1Q3ULM6 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC20.26■□□□□ 0.83
Uspl1Q3ULM6 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC20.26■□□□□ 0.83
Uspl1Q3ULM6 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Uspl1Q3ULM6 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Uspl1Q3ULM6 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Uspl1Q3ULM6 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Uspl1Q3ULM6 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Uspl1Q3ULM6 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Uspl1Q3ULM6 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Uspl1Q3ULM6 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Uspl1Q3ULM6 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Uspl1Q3ULM6 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Uspl1Q3ULM6 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Uspl1Q3ULM6 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
Uspl1Q3ULM6 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Uspl1Q3ULM6 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Uspl1Q3ULM6 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Uspl1Q3ULM6 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC20.25■□□□□ 0.83
Uspl1Q3ULM6 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Uspl1Q3ULM6 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC20.25■□□□□ 0.83
Uspl1Q3ULM6 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Uspl1Q3ULM6 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Uspl1Q3ULM6 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Uspl1Q3ULM6 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Uspl1Q3ULM6 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Uspl1Q3ULM6 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Uspl1Q3ULM6 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Uspl1Q3ULM6 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Uspl1Q3ULM6 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC20.24■□□□□ 0.83
Uspl1Q3ULM6 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Uspl1Q3ULM6 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Uspl1Q3ULM6 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC20.24■□□□□ 0.83
Uspl1Q3ULM6 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Uspl1Q3ULM6 AC147366.1-201ENSMUST00000227671 852 ntBASIC20.24■□□□□ 0.83
Uspl1Q3ULM6 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Uspl1Q3ULM6 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Uspl1Q3ULM6 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Uspl1Q3ULM6 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Uspl1Q3ULM6 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Uspl1Q3ULM6 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Uspl1Q3ULM6 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Uspl1Q3ULM6 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Uspl1Q3ULM6 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC20.23■□□□□ 0.83
Uspl1Q3ULM6 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Uspl1Q3ULM6 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Uspl1Q3ULM6 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC20.23■□□□□ 0.83
Uspl1Q3ULM6 Gm6550-201ENSMUST00000187574 993 ntBASIC20.23■□□□□ 0.83
Uspl1Q3ULM6 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC20.23■□□□□ 0.83
Uspl1Q3ULM6 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC20.23■□□□□ 0.83
Uspl1Q3ULM6 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC20.23■□□□□ 0.83
Uspl1Q3ULM6 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Uspl1Q3ULM6 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Uspl1Q3ULM6 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Uspl1Q3ULM6 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Uspl1Q3ULM6 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Uspl1Q3ULM6 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Uspl1Q3ULM6 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Uspl1Q3ULM6 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC20.22■□□□□ 0.83
Uspl1Q3ULM6 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Uspl1Q3ULM6 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Uspl1Q3ULM6 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Uspl1Q3ULM6 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Uspl1Q3ULM6 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Uspl1Q3ULM6 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC20.22■□□□□ 0.83
Uspl1Q3ULM6 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC20.22■□□□□ 0.83
Uspl1Q3ULM6 Gm9449-201ENSMUST00000207265 1011 ntBASIC20.22■□□□□ 0.83
Uspl1Q3ULM6 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC20.22■□□□□ 0.83
Uspl1Q3ULM6 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Uspl1Q3ULM6 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC20.22■□□□□ 0.83
Uspl1Q3ULM6 Gm42901-201ENSMUST00000197735 3171 ntBASIC20.22■□□□□ 0.83
Uspl1Q3ULM6 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms