Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trim63Q38HM4 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC13.05□□□□□ -0.32
Trim63Q38HM4 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim63Q38HM4 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim63Q38HM4 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim63Q38HM4 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim63Q38HM4 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trim63Q38HM4 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim63Q38HM4 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim63Q38HM4 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim63Q38HM4 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim63Q38HM4 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trim63Q38HM4 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim63Q38HM4 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC13.05□□□□□ -0.32
Trim63Q38HM4 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trim63Q38HM4 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim63Q38HM4 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim63Q38HM4 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim63Q38HM4 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim63Q38HM4 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim63Q38HM4 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim63Q38HM4 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trim63Q38HM4 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim63Q38HM4 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim63Q38HM4 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
Trim63Q38HM4 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim63Q38HM4 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC13.04□□□□□ -0.32
Trim63Q38HM4 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim63Q38HM4 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Trim63Q38HM4 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim63Q38HM4 Gm38391-201ENSMUST00000191720 4069 ntBASIC13.04□□□□□ -0.32
Trim63Q38HM4 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim63Q38HM4 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trim63Q38HM4 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Trim63Q38HM4 Gm11421-201ENSMUST00000122124 294 ntBASIC13.04□□□□□ -0.32
Trim63Q38HM4 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC13.04□□□□□ -0.32
Trim63Q38HM4 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim63Q38HM4 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC13.04□□□□□ -0.32
Trim63Q38HM4 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trim63Q38HM4 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim63Q38HM4 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim63Q38HM4 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim63Q38HM4 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim63Q38HM4 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC13.04□□□□□ -0.32
Trim63Q38HM4 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC13.04□□□□□ -0.32
Trim63Q38HM4 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trim63Q38HM4 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim63Q38HM4 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim63Q38HM4 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim63Q38HM4 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Trim63Q38HM4 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trim63Q38HM4 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trim63Q38HM4 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim63Q38HM4 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim63Q38HM4 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim63Q38HM4 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trim63Q38HM4 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim63Q38HM4 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim63Q38HM4 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim63Q38HM4 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Trim63Q38HM4 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trim63Q38HM4 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim63Q38HM4 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim63Q38HM4 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim63Q38HM4 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim63Q38HM4 BC037039-201ENSMUST00000192003 2205 ntBASIC13.03□□□□□ -0.32
Trim63Q38HM4 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trim63Q38HM4 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC13.03□□□□□ -0.32
Trim63Q38HM4 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC13.03□□□□□ -0.32
Trim63Q38HM4 Gm43060-201ENSMUST00000200621 289 ntBASIC13.03□□□□□ -0.32
Trim63Q38HM4 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC13.03□□□□□ -0.32
Trim63Q38HM4 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Trim63Q38HM4 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim63Q38HM4 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC13.03□□□□□ -0.32
Trim63Q38HM4 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim63Q38HM4 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Trim63Q38HM4 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC13.03□□□□□ -0.32
Trim63Q38HM4 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
Trim63Q38HM4 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trim63Q38HM4 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trim63Q38HM4 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC13.03□□□□□ -0.32
Trim63Q38HM4 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim63Q38HM4 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim63Q38HM4 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trim63Q38HM4 AC165080.2-201ENSMUST00000217491 1530 ntBASIC13.03□□□□□ -0.32
Trim63Q38HM4 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Trim63Q38HM4 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trim63Q38HM4 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Trim63Q38HM4 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim63Q38HM4 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim63Q38HM4 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Trim63Q38HM4 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trim63Q38HM4 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC13.02□□□□□ -0.32
Trim63Q38HM4 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trim63Q38HM4 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Trim63Q38HM4 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trim63Q38HM4 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trim63Q38HM4 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trim63Q38HM4 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trim63Q38HM4 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms