Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Ush2AQ2QI47 Dupd1-202ENSMUST00000224735 548 ntBASIC8.3□□□□□ -1.08
Ush2AQ2QI47 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Ush2AQ2QI47 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Ush2AQ2QI47 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Ush2AQ2QI47 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Ush2AQ2QI47 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Ush2AQ2QI47 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Ush2AQ2QI47 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Ush2AQ2QI47 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Ush2AQ2QI47 Mir877-201ENSMUST00000104738 85 ntBASIC8.3□□□□□ -1.08
Ush2AQ2QI47 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC8.3□□□□□ -1.08
Ush2AQ2QI47 AC126253.1-201ENSMUST00000227974 824 ntBASIC8.3□□□□□ -1.08
Ush2AQ2QI47 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC8.29□□□□□ -1.08
Ush2AQ2QI47 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Ush2AQ2QI47 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Ush2AQ2QI47 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Ush2AQ2QI47 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC8.29□□□□□ -1.08
Ush2AQ2QI47 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC8.29□□□□□ -1.08
Ush2AQ2QI47 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC8.29□□□□□ -1.08
Ush2AQ2QI47 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC8.29□□□□□ -1.08
Ush2AQ2QI47 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Ush2AQ2QI47 Gm43830-201ENSMUST00000198760 1067 ntBASIC8.29□□□□□ -1.08
Ush2AQ2QI47 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Ush2AQ2QI47 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC8.29□□□□□ -1.08
Ush2AQ2QI47 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Ush2AQ2QI47 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Ush2AQ2QI47 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Ush2AQ2QI47 Gm8565-201ENSMUST00000183259 1014 ntBASIC8.29□□□□□ -1.08
Ush2AQ2QI47 AC122459.1-201ENSMUST00000228373 885 ntBASIC8.29□□□□□ -1.08
Ush2AQ2QI47 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Ush2AQ2QI47 Gm6091-201ENSMUST00000098307 165 ntBASIC8.29□□□□□ -1.08
Ush2AQ2QI47 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC8.29□□□□□ -1.08
Ush2AQ2QI47 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Ush2AQ2QI47 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC8.29□□□□□ -1.08
Ush2AQ2QI47 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC8.29□□□□□ -1.08
Ush2AQ2QI47 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Ush2AQ2QI47 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC8.29□□□□□ -1.08
Ush2AQ2QI47 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Ush2AQ2QI47 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Ush2AQ2QI47 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Ush2AQ2QI47 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Ush2AQ2QI47 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Ush2AQ2QI47 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Ush2AQ2QI47 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Ush2AQ2QI47 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC8.29□□□□□ -1.08
Ush2AQ2QI47 Gm27839-201ENSMUST00000184242 106 ntBASIC8.29□□□□□ -1.08
Ush2AQ2QI47 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC8.29□□□□□ -1.08
Ush2AQ2QI47 Gm9182-201ENSMUST00000217829 639 ntBASIC8.29□□□□□ -1.08
Ush2AQ2QI47 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Ush2AQ2QI47 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Ush2AQ2QI47 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Ush2AQ2QI47 Dctn4-202ENSMUST00000223590 1530 ntBASIC8.28□□□□□ -1.08
Ush2AQ2QI47 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
Ush2AQ2QI47 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Ush2AQ2QI47 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC8.28□□□□□ -1.08
Ush2AQ2QI47 Mir1897-201ENSMUST00000122581 272 ntBASIC8.28□□□□□ -1.08
Ush2AQ2QI47 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Ush2AQ2QI47 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
Ush2AQ2QI47 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Ush2AQ2QI47 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Ush2AQ2QI47 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Ush2AQ2QI47 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC8.28□□□□□ -1.08
Ush2AQ2QI47 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Ush2AQ2QI47 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Ush2AQ2QI47 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Ush2AQ2QI47 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Ush2AQ2QI47 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Ush2AQ2QI47 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
Ush2AQ2QI47 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Ush2AQ2QI47 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
Ush2AQ2QI47 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Ush2AQ2QI47 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC8.28□□□□□ -1.08
Ush2AQ2QI47 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Ush2AQ2QI47 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
Ush2AQ2QI47 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Ush2AQ2QI47 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Ush2AQ2QI47 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Ush2AQ2QI47 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC8.28□□□□□ -1.08
Ush2AQ2QI47 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Ush2AQ2QI47 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Ush2AQ2QI47 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Ush2AQ2QI47 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
Ush2AQ2QI47 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
Ush2AQ2QI47 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Ush2AQ2QI47 AC158529.1-201ENSMUST00000223618 239 ntBASIC8.28□□□□□ -1.08
Ush2AQ2QI47 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Ush2AQ2QI47 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Ush2AQ2QI47 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Ush2AQ2QI47 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Ush2AQ2QI47 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.08
Ush2AQ2QI47 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.08
Ush2AQ2QI47 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.08
Ush2AQ2QI47 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Ush2AQ2QI47 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
Ush2AQ2QI47 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Ush2AQ2QI47 Selenot-ps-201ENSMUST00000119098 593 ntBASIC8.27□□□□□ -1.09
Ush2AQ2QI47 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC8.27□□□□□ -1.09
Ush2AQ2QI47 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Ush2AQ2QI47 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms