Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chd8Q09XV5 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chd8Q09XV5 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC14.03□□□□□ -0.16
Chd8Q09XV5 Mir6404-201ENSMUST00000183699 94 ntBASIC14.03□□□□□ -0.16
Chd8Q09XV5 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC14.03□□□□□ -0.16
Chd8Q09XV5 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chd8Q09XV5 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC14.03□□□□□ -0.16
Chd8Q09XV5 Gm10154-201ENSMUST00000084445 354 ntBASIC14.03□□□□□ -0.16
Chd8Q09XV5 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chd8Q09XV5 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chd8Q09XV5 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chd8Q09XV5 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Chd8Q09XV5 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC14.02□□□□□ -0.16
Chd8Q09XV5 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Chd8Q09XV5 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Chd8Q09XV5 Gm4875-201ENSMUST00000118257 786 ntBASIC14.02□□□□□ -0.16
Chd8Q09XV5 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC14.02□□□□□ -0.16
Chd8Q09XV5 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC14.02□□□□□ -0.16
Chd8Q09XV5 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC14.02□□□□□ -0.16
Chd8Q09XV5 Gm18624-201ENSMUST00000220966 658 ntBASIC14.02□□□□□ -0.16
Chd8Q09XV5 AC132317.1-201ENSMUST00000227227 962 ntBASIC14.02□□□□□ -0.16
Chd8Q09XV5 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Chd8Q09XV5 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Chd8Q09XV5 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC14.02□□□□□ -0.16
Chd8Q09XV5 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
Chd8Q09XV5 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Chd8Q09XV5 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Chd8Q09XV5 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Chd8Q09XV5 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Chd8Q09XV5 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Chd8Q09XV5 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Chd8Q09XV5 Gm16198-201ENSMUST00000118766 670 ntBASIC14.02□□□□□ -0.17
Chd8Q09XV5 Gm7584-201ENSMUST00000175829 940 ntBASIC14.02□□□□□ -0.17
Chd8Q09XV5 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC14.02□□□□□ -0.17
Chd8Q09XV5 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC14.02□□□□□ -0.17
Chd8Q09XV5 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Chd8Q09XV5 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Chd8Q09XV5 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Chd8Q09XV5 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC14.02□□□□□ -0.17
Chd8Q09XV5 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC14.02□□□□□ -0.17
Chd8Q09XV5 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Chd8Q09XV5 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Chd8Q09XV5 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Chd8Q09XV5 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Chd8Q09XV5 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chd8Q09XV5 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chd8Q09XV5 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chd8Q09XV5 Gm14660-201ENSMUST00000119809 575 ntBASIC14.01□□□□□ -0.17
Chd8Q09XV5 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Chd8Q09XV5 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chd8Q09XV5 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chd8Q09XV5 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chd8Q09XV5 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Chd8Q09XV5 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC14.01□□□□□ -0.17
Chd8Q09XV5 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Chd8Q09XV5 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chd8Q09XV5 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chd8Q09XV5 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chd8Q09XV5 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Chd8Q09XV5 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chd8Q09XV5 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chd8Q09XV5 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Chd8Q09XV5 Gm4204-201ENSMUST00000110798 1231 ntBASIC14.01□□□□□ -0.17
Chd8Q09XV5 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC14.01□□□□□ -0.17
Chd8Q09XV5 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chd8Q09XV5 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Chd8Q09XV5 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Chd8Q09XV5 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC14.01□□□□□ -0.17
Chd8Q09XV5 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chd8Q09XV5 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC14.01□□□□□ -0.17
Chd8Q09XV5 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chd8Q09XV5 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC14.01□□□□□ -0.17
Chd8Q09XV5 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Chd8Q09XV5 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Chd8Q09XV5 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC14□□□□□ -0.17
Chd8Q09XV5 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC14□□□□□ -0.17
Chd8Q09XV5 Mettl6-204ENSMUST00000227595 1027 ntBASIC14□□□□□ -0.17
Chd8Q09XV5 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Chd8Q09XV5 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Chd8Q09XV5 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Chd8Q09XV5 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Chd8Q09XV5 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Chd8Q09XV5 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC14□□□□□ -0.17
Chd8Q09XV5 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC14□□□□□ -0.17
Chd8Q09XV5 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Chd8Q09XV5 Gm43138-201ENSMUST00000199123 708 ntBASIC14□□□□□ -0.17
Chd8Q09XV5 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC14□□□□□ -0.17
Chd8Q09XV5 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC14□□□□□ -0.17
Chd8Q09XV5 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC14□□□□□ -0.17
Chd8Q09XV5 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC14□□□□□ -0.17
Chd8Q09XV5 AC125311.2-201ENSMUST00000227477 1940 ntBASIC14□□□□□ -0.17
Chd8Q09XV5 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Chd8Q09XV5 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Chd8Q09XV5 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Chd8Q09XV5 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Chd8Q09XV5 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Chd8Q09XV5 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Chd8Q09XV5 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Chd8Q09XV5 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Chd8Q09XV5 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms