Protein–RNA interactions for Protein: Q06507

Atf4, Cyclic AMP-dependent transcription factor ATF-4, mousemouse

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf4Q06507 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Atf4Q06507 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Atf4Q06507 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Atf4Q06507 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Atf4Q06507 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Atf4Q06507 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Atf4Q06507 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Atf4Q06507 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Atf4Q06507 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Atf4Q06507 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Atf4Q06507 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC14.96□□□□□ -0.01
Atf4Q06507 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Atf4Q06507 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC14.96□□□□□ -0.01
Atf4Q06507 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Atf4Q06507 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Atf4Q06507 Gm25990-201ENSMUST00000102440 86 ntBASIC14.96□□□□□ -0.01
Atf4Q06507 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC14.96□□□□□ -0.01
Atf4Q06507 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Atf4Q06507 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Atf4Q06507 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Atf4Q06507 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
Atf4Q06507 Gm6546-201ENSMUST00000192096 766 ntBASIC14.96□□□□□ -0.01
Atf4Q06507 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Atf4Q06507 CT010431.1-201ENSMUST00000221249 1080 ntBASIC14.96□□□□□ -0.01
Atf4Q06507 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Atf4Q06507 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Atf4Q06507 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Atf4Q06507 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Atf4Q06507 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Atf4Q06507 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Atf4Q06507 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC14.96□□□□□ -0.01
Atf4Q06507 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
Atf4Q06507 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Atf4Q06507 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Atf4Q06507 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.02
Atf4Q06507 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Atf4Q06507 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC14.95□□□□□ -0.02
Atf4Q06507 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Atf4Q06507 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Atf4Q06507 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC14.95□□□□□ -0.02
Atf4Q06507 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Atf4Q06507 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Atf4Q06507 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Atf4Q06507 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Atf4Q06507 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC14.95□□□□□ -0.02
Atf4Q06507 Gm16140-201ENSMUST00000117191 1060 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Atf4Q06507 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Atf4Q06507 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Atf4Q06507 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC14.95□□□□□ -0.02
Atf4Q06507 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC14.95□□□□□ -0.02
Atf4Q06507 4930412E21Rik-201ENSMUST00000194267 778 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Atf4Q06507 Gm44136-201ENSMUST00000203819 1106 ntBASIC14.95□□□□□ -0.02
Atf4Q06507 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Atf4Q06507 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Atf4Q06507 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Atf4Q06507 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Atf4Q06507 AL590614.2-201ENSMUST00000225374 1937 ntBASIC14.95□□□□□ -0.02
Atf4Q06507 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Atf4Q06507 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Atf4Q06507 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Atf4Q06507 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Atf4Q06507 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Atf4Q06507 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Atf4Q06507 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Atf4Q06507 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Atf4Q06507 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC14.94□□□□□ -0.02
Atf4Q06507 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Atf4Q06507 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Atf4Q06507 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Atf4Q06507 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Atf4Q06507 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC14.94□□□□□ -0.02
Atf4Q06507 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Atf4Q06507 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Atf4Q06507 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC14.94□□□□□ -0.02
Atf4Q06507 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Atf4Q06507 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Atf4Q06507 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Atf4Q06507 AU017674-201ENSMUST00000222864 720 ntTSL 3 BASIC14.94□□□□□ -0.02
Atf4Q06507 AC124408.1-201ENSMUST00000228938 707 ntBASIC14.94□□□□□ -0.02
Atf4Q06507 Olfr1212-201ENSMUST00000055895 936 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Atf4Q06507 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Atf4Q06507 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Atf4Q06507 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Atf4Q06507 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Atf4Q06507 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Atf4Q06507 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Atf4Q06507 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Atf4Q06507 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Atf4Q06507 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Atf4Q06507 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Atf4Q06507 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Atf4Q06507 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Atf4Q06507 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Atf4Q06507 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Atf4Q06507 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Atf4Q06507 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC14.94□□□□□ -0.02
Atf4Q06507 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Atf4Q06507 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Atf4Q06507 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Atf4Q06507 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms