Protein–RNA interactions for Protein: Q02789

Cacna1s, Voltage-dependent L-type calcium channel subunit alpha-1S, mousemouse

Predictions only

Length 1,880 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1sQ02789 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cacna1sQ02789 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cacna1sQ02789 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cacna1sQ02789 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cacna1sQ02789 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Cacna1sQ02789 Gm14042-201ENSMUST00000120139 833 ntBASIC19.73■□□□□ 0.75
Cacna1sQ02789 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC19.73■□□□□ 0.75
Cacna1sQ02789 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Cacna1sQ02789 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Cacna1sQ02789 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cacna1sQ02789 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cacna1sQ02789 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cacna1sQ02789 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Cacna1sQ02789 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cacna1sQ02789 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cacna1sQ02789 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC19.73■□□□□ 0.75
Cacna1sQ02789 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Cacna1sQ02789 Gm24543-201ENSMUST00000103867 82 ntBASIC19.73■□□□□ 0.75
Cacna1sQ02789 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC19.73■□□□□ 0.75
Cacna1sQ02789 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
Cacna1sQ02789 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC19.73■□□□□ 0.75
Cacna1sQ02789 Gm6745-201ENSMUST00000199216 526 ntBASIC19.73■□□□□ 0.75
Cacna1sQ02789 Gm18062-201ENSMUST00000208020 547 ntBASIC19.73■□□□□ 0.75
Cacna1sQ02789 Gm18055-201ENSMUST00000208254 547 ntBASIC19.73■□□□□ 0.75
Cacna1sQ02789 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC19.73■□□□□ 0.75
Cacna1sQ02789 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Cacna1sQ02789 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cacna1sQ02789 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Cacna1sQ02789 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Cacna1sQ02789 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cacna1sQ02789 Rbfox2-206ENSMUST00000227314 1810 ntBASIC19.72■□□□□ 0.75
Cacna1sQ02789 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cacna1sQ02789 Gm6263-201ENSMUST00000120029 1342 ntBASIC19.72■□□□□ 0.75
Cacna1sQ02789 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Cacna1sQ02789 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC19.72■□□□□ 0.75
Cacna1sQ02789 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Cacna1sQ02789 Gm6539-201ENSMUST00000119157 1064 ntBASIC19.72■□□□□ 0.75
Cacna1sQ02789 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Cacna1sQ02789 Gm28631-201ENSMUST00000190740 334 ntBASIC19.72■□□□□ 0.75
Cacna1sQ02789 AC153962.4-201ENSMUST00000217878 242 ntBASIC19.72■□□□□ 0.75
Cacna1sQ02789 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cacna1sQ02789 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cacna1sQ02789 Gm7901-201ENSMUST00000120430 1597 ntBASIC19.72■□□□□ 0.75
Cacna1sQ02789 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cacna1sQ02789 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cacna1sQ02789 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cacna1sQ02789 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Cacna1sQ02789 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC19.71■□□□□ 0.75
Cacna1sQ02789 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cacna1sQ02789 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cacna1sQ02789 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Cacna1sQ02789 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cacna1sQ02789 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Cacna1sQ02789 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cacna1sQ02789 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cacna1sQ02789 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Cacna1sQ02789 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cacna1sQ02789 Gm14026-201ENSMUST00000120625 1789 ntBASIC19.71■□□□□ 0.75
Cacna1sQ02789 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cacna1sQ02789 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cacna1sQ02789 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cacna1sQ02789 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC19.71■□□□□ 0.75
Cacna1sQ02789 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Cacna1sQ02789 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cacna1sQ02789 Gm9719-201ENSMUST00000162765 543 ntBASIC19.71■□□□□ 0.75
Cacna1sQ02789 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Cacna1sQ02789 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Cacna1sQ02789 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cacna1sQ02789 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cacna1sQ02789 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cacna1sQ02789 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cacna1sQ02789 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC19.7■□□□□ 0.74
Cacna1sQ02789 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cacna1sQ02789 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cacna1sQ02789 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC19.7■□□□□ 0.74
Cacna1sQ02789 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cacna1sQ02789 Gm11478-201ENSMUST00000117851 599 ntBASIC19.7■□□□□ 0.74
Cacna1sQ02789 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cacna1sQ02789 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cacna1sQ02789 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Cacna1sQ02789 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Cacna1sQ02789 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Cacna1sQ02789 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cacna1sQ02789 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Cacna1sQ02789 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cacna1sQ02789 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
Cacna1sQ02789 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC19.69■□□□□ 0.74
Cacna1sQ02789 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Cacna1sQ02789 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC19.69■□□□□ 0.74
Cacna1sQ02789 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC19.69■□□□□ 0.74
Cacna1sQ02789 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cacna1sQ02789 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cacna1sQ02789 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cacna1sQ02789 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cacna1sQ02789 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cacna1sQ02789 AC154231.1-201ENSMUST00000220564 2175 ntBASIC19.69■□□□□ 0.74
Cacna1sQ02789 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Cacna1sQ02789 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cacna1sQ02789 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cacna1sQ02789 Gm42612-201ENSMUST00000197986 623 ntBASIC19.69■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms