Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scn1bP97952 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Scn1bP97952 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scn1bP97952 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scn1bP97952 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC14.45□□□□□ -0.1
Scn1bP97952 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scn1bP97952 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scn1bP97952 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC14.45□□□□□ -0.1
Scn1bP97952 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC14.45□□□□□ -0.1
Scn1bP97952 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scn1bP97952 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Scn1bP97952 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Scn1bP97952 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scn1bP97952 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC14.44□□□□□ -0.1
Scn1bP97952 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scn1bP97952 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scn1bP97952 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scn1bP97952 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scn1bP97952 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scn1bP97952 Gm15378-201ENSMUST00000121894 207 ntBASIC14.44□□□□□ -0.1
Scn1bP97952 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC14.44□□□□□ -0.1
Scn1bP97952 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC14.44□□□□□ -0.1
Scn1bP97952 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scn1bP97952 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Scn1bP97952 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scn1bP97952 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scn1bP97952 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Scn1bP97952 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
Scn1bP97952 AC124581.1-201ENSMUST00000225416 1399 ntBASIC14.44□□□□□ -0.1
Scn1bP97952 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scn1bP97952 Gm37728-201ENSMUST00000195025 2292 ntBASIC14.44□□□□□ -0.1
Scn1bP97952 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scn1bP97952 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scn1bP97952 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Scn1bP97952 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scn1bP97952 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC14.43□□□□□ -0.1
Scn1bP97952 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Scn1bP97952 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scn1bP97952 Gm5643-201ENSMUST00000117081 966 ntBASIC14.43□□□□□ -0.1
Scn1bP97952 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scn1bP97952 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Scn1bP97952 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC14.43□□□□□ -0.1
Scn1bP97952 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Scn1bP97952 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scn1bP97952 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scn1bP97952 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scn1bP97952 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scn1bP97952 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scn1bP97952 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
Scn1bP97952 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Scn1bP97952 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Scn1bP97952 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scn1bP97952 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scn1bP97952 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC14.43□□□□□ -0.1
Scn1bP97952 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scn1bP97952 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn1bP97952 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Scn1bP97952 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Scn1bP97952 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn1bP97952 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn1bP97952 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn1bP97952 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC14.42□□□□□ -0.1
Scn1bP97952 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn1bP97952 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Scn1bP97952 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC14.42□□□□□ -0.1
Scn1bP97952 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC14.42□□□□□ -0.1
Scn1bP97952 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Scn1bP97952 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn1bP97952 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn1bP97952 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn1bP97952 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn1bP97952 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC14.42□□□□□ -0.1
Scn1bP97952 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Scn1bP97952 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC14.42□□□□□ -0.1
Scn1bP97952 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn1bP97952 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC14.42□□□□□ -0.1
Scn1bP97952 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn1bP97952 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC14.42□□□□□ -0.1
Scn1bP97952 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn1bP97952 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn1bP97952 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn1bP97952 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Scn1bP97952 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Scn1bP97952 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn1bP97952 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn1bP97952 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC14.41□□□□□ -0.1
Scn1bP97952 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Scn1bP97952 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Scn1bP97952 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Scn1bP97952 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Scn1bP97952 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC14.41□□□□□ -0.1
Scn1bP97952 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn1bP97952 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Scn1bP97952 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Scn1bP97952 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Scn1bP97952 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn1bP97952 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn1bP97952 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn1bP97952 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Scn1bP97952 Gm13034-201ENSMUST00000121342 3177 ntBASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms