Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Gm10576-201ENSMUST00000191927 825 ntBASIC16.11■□□□□ 0.17
Ybx1P62960 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC16.11■□□□□ 0.17
Ybx1P62960 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ybx1P62960 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
Ybx1P62960 AC159295.1-201ENSMUST00000225326 940 ntBASIC16.11■□□□□ 0.17
Ybx1P62960 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ybx1P62960 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ybx1P62960 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ybx1P62960 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Ybx1P62960 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ybx1P62960 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ybx1P62960 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ybx1P62960 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ybx1P62960 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ybx1P62960 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Ybx1P62960 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ybx1P62960 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ybx1P62960 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ybx1P62960 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ybx1P62960 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Ybx1P62960 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ybx1P62960 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Ybx1P62960 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ybx1P62960 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ybx1P62960 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
Ybx1P62960 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ybx1P62960 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ybx1P62960 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC16.1■□□□□ 0.17
Ybx1P62960 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC16.1■□□□□ 0.17
Ybx1P62960 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ybx1P62960 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ybx1P62960 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ybx1P62960 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC16.1■□□□□ 0.17
Ybx1P62960 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ybx1P62960 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC16.1■□□□□ 0.17
Ybx1P62960 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC16.1■□□□□ 0.17
Ybx1P62960 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ybx1P62960 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ybx1P62960 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC16.1■□□□□ 0.17
Ybx1P62960 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Ybx1P62960 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ybx1P62960 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ybx1P62960 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ybx1P62960 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ybx1P62960 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ybx1P62960 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ybx1P62960 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ybx1P62960 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
Ybx1P62960 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
Ybx1P62960 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ybx1P62960 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ybx1P62960 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ybx1P62960 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ybx1P62960 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ybx1P62960 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ybx1P62960 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ybx1P62960 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Ybx1P62960 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ybx1P62960 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ybx1P62960 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Ybx1P62960 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC16.09■□□□□ 0.17
Ybx1P62960 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC16.09■□□□□ 0.17
Ybx1P62960 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Ybx1P62960 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ybx1P62960 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ybx1P62960 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ybx1P62960 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ybx1P62960 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ybx1P62960 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ybx1P62960 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ybx1P62960 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ybx1P62960 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
Ybx1P62960 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ybx1P62960 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Ybx1P62960 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
Ybx1P62960 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Ybx1P62960 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC16.08■□□□□ 0.17
Ybx1P62960 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
Ybx1P62960 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
Ybx1P62960 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Ybx1P62960 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Ybx1P62960 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Ybx1P62960 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ybx1P62960 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ybx1P62960 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Ybx1P62960 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ybx1P62960 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC16.08■□□□□ 0.16
Ybx1P62960 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC16.08■□□□□ 0.16
Ybx1P62960 Gm44492-201ENSMUST00000197012 141 ntBASIC16.08■□□□□ 0.16
Ybx1P62960 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC16.08■□□□□ 0.16
Ybx1P62960 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ybx1P62960 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC16.08■□□□□ 0.16
Ybx1P62960 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.16
Ybx1P62960 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Ybx1P62960 Best4-ps-201ENSMUST00000129783 1380 ntBASIC16.08■□□□□ 0.16
Ybx1P62960 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ybx1P62960 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Ybx1P62960 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC16.08■□□□□ 0.16
Ybx1P62960 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ybx1P62960 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC16.08■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms