Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rpl39P62892 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Rpl39P62892 Gm13181-201ENSMUST00000120117 1069 ntBASIC11.26□□□□□ -0.61
Rpl39P62892 Gm44450-201ENSMUST00000199528 114 ntBASIC11.26□□□□□ -0.61
Rpl39P62892 Gm16042-201ENSMUST00000204813 1247 ntBASIC11.26□□□□□ -0.61
Rpl39P62892 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC11.26□□□□□ -0.61
Rpl39P62892 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rpl39P62892 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rpl39P62892 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rpl39P62892 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rpl39P62892 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Rpl39P62892 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Rpl39P62892 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rpl39P62892 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Rpl39P62892 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rpl39P62892 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Rpl39P62892 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rpl39P62892 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rpl39P62892 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC11.26□□□□□ -0.61
Rpl39P62892 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rpl39P62892 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Rpl39P62892 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rpl39P62892 Gm14026-201ENSMUST00000120625 1789 ntBASIC11.26□□□□□ -0.61
Rpl39P62892 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Rpl39P62892 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Rpl39P62892 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rpl39P62892 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rpl39P62892 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
Rpl39P62892 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rpl39P62892 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Rpl39P62892 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC11.25□□□□□ -0.61
Rpl39P62892 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rpl39P62892 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rpl39P62892 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Rpl39P62892 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rpl39P62892 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
Rpl39P62892 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rpl39P62892 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rpl39P62892 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rpl39P62892 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Rpl39P62892 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rpl39P62892 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rpl39P62892 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rpl39P62892 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Rpl39P62892 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Rpl39P62892 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Rpl39P62892 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC11.25□□□□□ -0.61
Rpl39P62892 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rpl39P62892 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Rpl39P62892 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Rpl39P62892 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC11.25□□□□□ -0.61
Rpl39P62892 Gm12441-201ENSMUST00000121806 588 ntBASIC11.25□□□□□ -0.61
Rpl39P62892 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Rpl39P62892 Gm18421-201ENSMUST00000204122 625 ntBASIC11.25□□□□□ -0.61
Rpl39P62892 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Rpl39P62892 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rpl39P62892 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Rpl39P62892 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Rpl39P62892 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rpl39P62892 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rpl39P62892 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC11.25□□□□□ -0.61
Rpl39P62892 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rpl39P62892 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rpl39P62892 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC11.25□□□□□ -0.61
Rpl39P62892 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rpl39P62892 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rpl39P62892 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rpl39P62892 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Rpl39P62892 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Rpl39P62892 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC11.25□□□□□ -0.61
Rpl39P62892 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC11.25□□□□□ -0.61
Rpl39P62892 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rpl39P62892 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Rpl39P62892 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rpl39P62892 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rpl39P62892 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC11.24□□□□□ -0.61
Rpl39P62892 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Rpl39P62892 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rpl39P62892 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rpl39P62892 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC11.24□□□□□ -0.61
Rpl39P62892 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rpl39P62892 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC11.24□□□□□ -0.61
Rpl39P62892 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rpl39P62892 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rpl39P62892 Gm38058-201ENSMUST00000194323 4368 ntBASIC11.24□□□□□ -0.61
Rpl39P62892 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC11.24□□□□□ -0.61
Rpl39P62892 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC11.24□□□□□ -0.61
Rpl39P62892 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC11.24□□□□□ -0.61
Rpl39P62892 AC175538.1-201ENSMUST00000225343 1269 ntBASIC11.24□□□□□ -0.61
Rpl39P62892 Timm23-208ENSMUST00000226683 750 ntBASIC11.24□□□□□ -0.61
Rpl39P62892 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Rpl39P62892 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rpl39P62892 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Rpl39P62892 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Rpl39P62892 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Rpl39P62892 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rpl39P62892 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC11.24□□□□□ -0.61
Rpl39P62892 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC11.24□□□□□ -0.61
Rpl39P62892 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rpl39P62892 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms