Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Tpm1P58771 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tpm1P58771 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tpm1P58771 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tpm1P58771 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Tpm1P58771 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tpm1P58771 Gm37912-201ENSMUST00000191895 3076 ntBASIC17.6■□□□□ 0.41
Tpm1P58771 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tpm1P58771 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tpm1P58771 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Tpm1P58771 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tpm1P58771 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tpm1P58771 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tpm1P58771 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tpm1P58771 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tpm1P58771 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tpm1P58771 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tpm1P58771 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tpm1P58771 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tpm1P58771 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Tpm1P58771 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC17.59■□□□□ 0.41
Tpm1P58771 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tpm1P58771 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tpm1P58771 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tpm1P58771 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Tpm1P58771 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC17.59■□□□□ 0.41
Tpm1P58771 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC17.59■□□□□ 0.41
Tpm1P58771 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Tpm1P58771 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC17.59■□□□□ 0.41
Tpm1P58771 Gm29707-201ENSMUST00000196325 491 ntBASIC17.59■□□□□ 0.41
Tpm1P58771 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tpm1P58771 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Tpm1P58771 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tpm1P58771 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tpm1P58771 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Tpm1P58771 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tpm1P58771 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tpm1P58771 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Tpm1P58771 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Tpm1P58771 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Tpm1P58771 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Tpm1P58771 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Tpm1P58771 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Tpm1P58771 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC17.58■□□□□ 0.4
Tpm1P58771 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC17.58■□□□□ 0.4
Tpm1P58771 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC17.58■□□□□ 0.4
Tpm1P58771 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Tpm1P58771 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Tpm1P58771 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Tpm1P58771 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC17.58■□□□□ 0.4
Tpm1P58771 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Tpm1P58771 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Tpm1P58771 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Tpm1P58771 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Tpm1P58771 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Tpm1P58771 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Tpm1P58771 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Tpm1P58771 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC17.58■□□□□ 0.4
Tpm1P58771 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Tpm1P58771 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Tpm1P58771 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Tpm1P58771 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tpm1P58771 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tpm1P58771 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Tpm1P58771 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tpm1P58771 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tpm1P58771 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tpm1P58771 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tpm1P58771 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tpm1P58771 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC17.57■□□□□ 0.4
Tpm1P58771 Gm13474-201ENSMUST00000122466 815 ntBASIC17.57■□□□□ 0.4
Tpm1P58771 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC17.57■□□□□ 0.4
Tpm1P58771 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC17.57■□□□□ 0.4
Tpm1P58771 Gm10653-202ENSMUST00000139570 835 ntBASIC17.57■□□□□ 0.4
Tpm1P58771 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Tpm1P58771 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC17.57■□□□□ 0.4
Tpm1P58771 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Tpm1P58771 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Tpm1P58771 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tpm1P58771 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tpm1P58771 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tpm1P58771 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC17.57■□□□□ 0.4
Tpm1P58771 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Tpm1P58771 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tpm1P58771 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Tpm1P58771 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Tpm1P58771 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Tpm1P58771 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tpm1P58771 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tpm1P58771 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tpm1P58771 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Tpm1P58771 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tpm1P58771 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tpm1P58771 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tpm1P58771 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC17.56■□□□□ 0.4
Tpm1P58771 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC17.56■□□□□ 0.4
Tpm1P58771 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Tpm1P58771 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tpm1P58771 Gm11336-201ENSMUST00000118168 334 ntBASIC17.56■□□□□ 0.4
Tpm1P58771 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms