Protein–RNA interactions for Protein: P57748

Mmp20, Matrix metalloproteinase-20, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp20P57748 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Mmp20P57748 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Mmp20P57748 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Mmp20P57748 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Mmp20P57748 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Mmp20P57748 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Mmp20P57748 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC17.95■□□□□ 0.46
Mmp20P57748 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC17.95■□□□□ 0.46
Mmp20P57748 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC17.95■□□□□ 0.46
Mmp20P57748 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Mmp20P57748 Gpr146-202ENSMUST00000053120 1040 ntBASIC17.95■□□□□ 0.46
Mmp20P57748 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC17.95■□□□□ 0.46
Mmp20P57748 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Mmp20P57748 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
Mmp20P57748 Rbfox2-206ENSMUST00000227314 1810 ntBASIC17.95■□□□□ 0.46
Mmp20P57748 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Mmp20P57748 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Mmp20P57748 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC17.95■□□□□ 0.46
Mmp20P57748 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Mmp20P57748 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
Mmp20P57748 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Mmp20P57748 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Mmp20P57748 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Mmp20P57748 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Mmp20P57748 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Mmp20P57748 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Mmp20P57748 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Mmp20P57748 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Mmp20P57748 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Mmp20P57748 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Mmp20P57748 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Mmp20P57748 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC17.94■□□□□ 0.46
Mmp20P57748 Rpph1-201ENSMUST00000175096 319 ntBASIC17.94■□□□□ 0.46
Mmp20P57748 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC17.94■□□□□ 0.46
Mmp20P57748 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Mmp20P57748 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Mmp20P57748 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Mmp20P57748 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Mmp20P57748 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Mmp20P57748 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Mmp20P57748 Fgf17-202ENSMUST00000227123 1336 ntBASIC17.94■□□□□ 0.46
Mmp20P57748 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Mmp20P57748 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Mmp20P57748 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.94■□□□□ 0.46
Mmp20P57748 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Mmp20P57748 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Mmp20P57748 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Mmp20P57748 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Mmp20P57748 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Mmp20P57748 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
Mmp20P57748 Gm12008-201ENSMUST00000117791 755 ntBASIC17.93■□□□□ 0.46
Mmp20P57748 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC17.93■□□□□ 0.46
Mmp20P57748 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Mmp20P57748 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Mmp20P57748 Gm25948-201ENSMUST00000175334 112 ntBASIC17.93■□□□□ 0.46
Mmp20P57748 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Mmp20P57748 Gm20949-201ENSMUST00000206478 952 ntBASIC17.93■□□□□ 0.46
Mmp20P57748 AC140397.2-201ENSMUST00000224213 834 ntBASIC17.93■□□□□ 0.46
Mmp20P57748 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Mmp20P57748 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Mmp20P57748 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Mmp20P57748 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Mmp20P57748 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Mmp20P57748 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Mmp20P57748 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Mmp20P57748 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Mmp20P57748 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.92■□□□□ 0.46
Mmp20P57748 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Mmp20P57748 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Mmp20P57748 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Mmp20P57748 Gm9385-201ENSMUST00000117563 472 ntBASIC17.92■□□□□ 0.46
Mmp20P57748 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC17.92■□□□□ 0.46
Mmp20P57748 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
Mmp20P57748 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC17.92■□□□□ 0.46
Mmp20P57748 Gm27321-201ENSMUST00000185021 205 ntBASIC17.92■□□□□ 0.46
Mmp20P57748 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC17.92■□□□□ 0.46
Mmp20P57748 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC17.92■□□□□ 0.46
Mmp20P57748 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Mmp20P57748 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Mmp20P57748 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC17.92■□□□□ 0.46
Mmp20P57748 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Mmp20P57748 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Mmp20P57748 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Mmp20P57748 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Mmp20P57748 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Mmp20P57748 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Mmp20P57748 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Mmp20P57748 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Mmp20P57748 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Mmp20P57748 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Mmp20P57748 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Mmp20P57748 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Mmp20P57748 Gm13216-201ENSMUST00000117145 591 ntBASIC17.91■□□□□ 0.46
Mmp20P57748 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Mmp20P57748 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC17.91■□□□□ 0.46
Mmp20P57748 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC17.91■□□□□ 0.46
Mmp20P57748 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Mmp20P57748 Gm43125-201ENSMUST00000201724 730 ntBASIC17.91■□□□□ 0.46
Mmp20P57748 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC17.91■□□□□ 0.46
Mmp20P57748 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms