Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sssca1P56873 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sssca1P56873 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.37
Sssca1P56873 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sssca1P56873 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Sssca1P56873 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sssca1P56873 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC12.76□□□□□ -0.37
Sssca1P56873 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC12.76□□□□□ -0.37
Sssca1P56873 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sssca1P56873 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sssca1P56873 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
Sssca1P56873 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sssca1P56873 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sssca1P56873 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sssca1P56873 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sssca1P56873 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC12.76□□□□□ -0.37
Sssca1P56873 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC12.76□□□□□ -0.37
Sssca1P56873 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
Sssca1P56873 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC12.76□□□□□ -0.37
Sssca1P56873 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sssca1P56873 Gm5417-201ENSMUST00000079706 384 ntBASIC12.76□□□□□ -0.37
Sssca1P56873 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Sssca1P56873 Gm10812-201ENSMUST00000099864 546 ntBASIC12.76□□□□□ -0.37
Sssca1P56873 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Sssca1P56873 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Sssca1P56873 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
Sssca1P56873 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Sssca1P56873 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sssca1P56873 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sssca1P56873 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sssca1P56873 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sssca1P56873 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sssca1P56873 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Sssca1P56873 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Sssca1P56873 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sssca1P56873 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sssca1P56873 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sssca1P56873 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
Sssca1P56873 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Sssca1P56873 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sssca1P56873 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sssca1P56873 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sssca1P56873 Gm38042-201ENSMUST00000191614 5208 ntBASIC12.75□□□□□ -0.37
Sssca1P56873 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
Sssca1P56873 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sssca1P56873 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sssca1P56873 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC12.75□□□□□ -0.37
Sssca1P56873 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC12.75□□□□□ -0.37
Sssca1P56873 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Sssca1P56873 Gm29257-201ENSMUST00000186115 639 ntBASIC12.75□□□□□ -0.37
Sssca1P56873 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Sssca1P56873 Gm30025-201ENSMUST00000218555 728 ntBASIC12.75□□□□□ -0.37
Sssca1P56873 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sssca1P56873 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sssca1P56873 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sssca1P56873 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sssca1P56873 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Sssca1P56873 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sssca1P56873 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sssca1P56873 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC12.75□□□□□ -0.37
Sssca1P56873 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Sssca1P56873 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Sssca1P56873 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sssca1P56873 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sssca1P56873 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Sssca1P56873 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sssca1P56873 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sssca1P56873 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Sssca1P56873 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sssca1P56873 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sssca1P56873 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sssca1P56873 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Sssca1P56873 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sssca1P56873 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC12.74□□□□□ -0.37
Sssca1P56873 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sssca1P56873 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sssca1P56873 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sssca1P56873 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sssca1P56873 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC12.74□□□□□ -0.37
Sssca1P56873 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Sssca1P56873 AC122351.1-201ENSMUST00000220467 126 ntBASIC12.74□□□□□ -0.37
Sssca1P56873 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sssca1P56873 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Sssca1P56873 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
Sssca1P56873 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Sssca1P56873 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Sssca1P56873 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sssca1P56873 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sssca1P56873 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sssca1P56873 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sssca1P56873 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Sssca1P56873 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC12.73□□□□□ -0.37
Sssca1P56873 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sssca1P56873 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Sssca1P56873 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sssca1P56873 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sssca1P56873 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sssca1P56873 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sssca1P56873 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sssca1P56873 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms