Protein–RNA interactions for Protein: P56726

Smo, Smoothened homolog, mousemouse

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SmoP56726 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SmoP56726 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SmoP56726 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC15.8■□□□□ 0.12
SmoP56726 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SmoP56726 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SmoP56726 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SmoP56726 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SmoP56726 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SmoP56726 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SmoP56726 Grk6-207ENSMUST00000225925 2769 ntBASIC15.8■□□□□ 0.12
SmoP56726 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SmoP56726 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC15.8■□□□□ 0.12
SmoP56726 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC15.8■□□□□ 0.12
SmoP56726 Gm27628-201ENSMUST00000184911 107 ntBASIC15.8■□□□□ 0.12
SmoP56726 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SmoP56726 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SmoP56726 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SmoP56726 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SmoP56726 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SmoP56726 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SmoP56726 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SmoP56726 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SmoP56726 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SmoP56726 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
SmoP56726 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC15.79■□□□□ 0.12
SmoP56726 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SmoP56726 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SmoP56726 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SmoP56726 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SmoP56726 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC15.79■□□□□ 0.12
SmoP56726 AC153526.5-201ENSMUST00000218661 2147 ntBASIC15.79■□□□□ 0.12
SmoP56726 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SmoP56726 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SmoP56726 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SmoP56726 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SmoP56726 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
SmoP56726 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SmoP56726 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SmoP56726 Gm6184-201ENSMUST00000120403 1261 ntBASIC15.79■□□□□ 0.12
SmoP56726 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC15.79■□□□□ 0.12
SmoP56726 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC15.79■□□□□ 0.12
SmoP56726 Gm43514-201ENSMUST00000198852 424 ntBASIC15.79■□□□□ 0.12
SmoP56726 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC15.79■□□□□ 0.12
SmoP56726 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
SmoP56726 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SmoP56726 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SmoP56726 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SmoP56726 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SmoP56726 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SmoP56726 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
SmoP56726 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SmoP56726 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SmoP56726 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SmoP56726 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SmoP56726 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SmoP56726 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SmoP56726 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
SmoP56726 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SmoP56726 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
SmoP56726 Gm42473-201ENSMUST00000201056 2291 ntBASIC15.78■□□□□ 0.12
SmoP56726 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
SmoP56726 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SmoP56726 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
SmoP56726 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SmoP56726 Gm11764-201ENSMUST00000120221 623 ntBASIC15.78■□□□□ 0.12
SmoP56726 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC15.78■□□□□ 0.12
SmoP56726 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SmoP56726 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC15.78■□□□□ 0.12
SmoP56726 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SmoP56726 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
SmoP56726 Gm18206-201ENSMUST00000207027 926 ntBASIC15.78■□□□□ 0.12
SmoP56726 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC15.78■□□□□ 0.12
SmoP56726 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SmoP56726 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SmoP56726 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SmoP56726 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SmoP56726 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SmoP56726 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SmoP56726 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SmoP56726 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SmoP56726 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SmoP56726 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
SmoP56726 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
SmoP56726 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SmoP56726 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
SmoP56726 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SmoP56726 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SmoP56726 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SmoP56726 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC15.77■□□□□ 0.12
SmoP56726 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SmoP56726 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.12
SmoP56726 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC15.77■□□□□ 0.12
SmoP56726 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
SmoP56726 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SmoP56726 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC15.77■□□□□ 0.12
SmoP56726 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC15.77■□□□□ 0.12
SmoP56726 AC122024.2-201ENSMUST00000220086 871 ntBASIC15.77■□□□□ 0.12
SmoP56726 AC158538.2-201ENSMUST00000225455 906 ntBASIC15.77■□□□□ 0.12
SmoP56726 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SmoP56726 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms