Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdh11P55288 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdh11P55288 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC14.39□□□□□ -0.11
Cdh11P55288 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdh11P55288 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC14.39□□□□□ -0.11
Cdh11P55288 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
Cdh11P55288 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cdh11P55288 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cdh11P55288 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Cdh11P55288 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdh11P55288 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Cdh11P55288 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdh11P55288 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Cdh11P55288 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdh11P55288 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdh11P55288 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC14.38□□□□□ -0.11
Cdh11P55288 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdh11P55288 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cdh11P55288 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdh11P55288 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Cdh11P55288 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdh11P55288 AC154412.1-201ENSMUST00000226540 2786 ntBASIC14.38□□□□□ -0.11
Cdh11P55288 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdh11P55288 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdh11P55288 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdh11P55288 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdh11P55288 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdh11P55288 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC14.38□□□□□ -0.11
Cdh11P55288 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdh11P55288 Gm17807-201ENSMUST00000186869 298 ntBASIC14.38□□□□□ -0.11
Cdh11P55288 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC14.38□□□□□ -0.11
Cdh11P55288 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdh11P55288 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdh11P55288 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cdh11P55288 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdh11P55288 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdh11P55288 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cdh11P55288 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Cdh11P55288 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdh11P55288 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Cdh11P55288 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdh11P55288 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Cdh11P55288 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdh11P55288 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdh11P55288 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdh11P55288 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdh11P55288 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdh11P55288 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Cdh11P55288 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdh11P55288 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdh11P55288 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Cdh11P55288 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC14.37□□□□□ -0.11
Cdh11P55288 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdh11P55288 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdh11P55288 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Cdh11P55288 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdh11P55288 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
Cdh11P55288 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdh11P55288 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdh11P55288 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdh11P55288 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdh11P55288 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdh11P55288 Sybu-209ENSMUST00000228639 4113 ntBASIC14.37□□□□□ -0.11
Cdh11P55288 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdh11P55288 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdh11P55288 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC14.37□□□□□ -0.11
Cdh11P55288 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdh11P55288 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC14.37□□□□□ -0.11
Cdh11P55288 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdh11P55288 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdh11P55288 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdh11P55288 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cdh11P55288 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdh11P55288 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Cdh11P55288 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cdh11P55288 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdh11P55288 Gm27741-201ENSMUST00000185060 237 ntBASIC14.36□□□□□ -0.11
Cdh11P55288 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC14.36□□□□□ -0.11
Cdh11P55288 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC14.36□□□□□ -0.11
Cdh11P55288 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC14.36□□□□□ -0.11
Cdh11P55288 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Cdh11P55288 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdh11P55288 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdh11P55288 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cdh11P55288 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cdh11P55288 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cdh11P55288 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdh11P55288 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdh11P55288 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdh11P55288 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdh11P55288 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdh11P55288 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cdh11P55288 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cdh11P55288 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
Cdh11P55288 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Cdh11P55288 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdh11P55288 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Cdh11P55288 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdh11P55288 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdh11P55288 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms