Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nub1P54729 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC16.95■□□□□ 0.3
Nub1P54729 Gm34391-201ENSMUST00000203706 907 ntBASIC16.95■□□□□ 0.3
Nub1P54729 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nub1P54729 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Nub1P54729 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nub1P54729 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC16.95■□□□□ 0.3
Nub1P54729 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nub1P54729 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nub1P54729 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC16.95■□□□□ 0.3
Nub1P54729 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nub1P54729 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
Nub1P54729 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nub1P54729 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC16.95■□□□□ 0.3
Nub1P54729 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nub1P54729 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nub1P54729 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nub1P54729 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nub1P54729 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nub1P54729 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nub1P54729 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nub1P54729 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nub1P54729 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Nub1P54729 Gm17971-201ENSMUST00000190239 806 ntBASIC16.94■□□□□ 0.3
Nub1P54729 Gm7506-201ENSMUST00000207758 815 ntBASIC16.94■□□□□ 0.3
Nub1P54729 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nub1P54729 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nub1P54729 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nub1P54729 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nub1P54729 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nub1P54729 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nub1P54729 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nub1P54729 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC16.94■□□□□ 0.3
Nub1P54729 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nub1P54729 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nub1P54729 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Nub1P54729 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nub1P54729 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nub1P54729 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nub1P54729 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nub1P54729 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Nub1P54729 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nub1P54729 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nub1P54729 Gm38327-201ENSMUST00000195852 1755 ntBASIC16.93■□□□□ 0.3
Nub1P54729 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC16.93■□□□□ 0.3
Nub1P54729 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC16.93■□□□□ 0.3
Nub1P54729 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Nub1P54729 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nub1P54729 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Nub1P54729 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Nub1P54729 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nub1P54729 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nub1P54729 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nub1P54729 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nub1P54729 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nub1P54729 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nub1P54729 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Nub1P54729 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Nub1P54729 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
Nub1P54729 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nub1P54729 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nub1P54729 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Nub1P54729 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Nub1P54729 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nub1P54729 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Nub1P54729 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nub1P54729 AC153526.5-201ENSMUST00000218661 2147 ntBASIC16.92■□□□□ 0.3
Nub1P54729 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nub1P54729 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nub1P54729 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nub1P54729 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nub1P54729 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nub1P54729 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nub1P54729 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nub1P54729 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC16.92■□□□□ 0.3
Nub1P54729 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Nub1P54729 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nub1P54729 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nub1P54729 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nub1P54729 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Nub1P54729 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nub1P54729 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nub1P54729 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nub1P54729 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nub1P54729 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nub1P54729 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nub1P54729 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC16.91■□□□□ 0.3
Nub1P54729 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC16.91■□□□□ 0.3
Nub1P54729 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nub1P54729 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nub1P54729 Birc2-201ENSMUST00000054878 378 ntBASIC16.91■□□□□ 0.3
Nub1P54729 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Nub1P54729 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nub1P54729 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Nub1P54729 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
Nub1P54729 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nub1P54729 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nub1P54729 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Nub1P54729 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Nub1P54729 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms