Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sox3P53784 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sox3P53784 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC15.07■□□□□ 0
Sox3P53784 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC15.07■□□□□ 0
Sox3P53784 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Sox3P53784 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC15.07■□□□□ 0
Sox3P53784 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC15.07■□□□□ 0
Sox3P53784 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Sox3P53784 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Sox3P53784 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Sox3P53784 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Sox3P53784 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sox3P53784 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Sox3P53784 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Sox3P53784 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sox3P53784 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC15.07■□□□□ 0
Sox3P53784 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC15.07■□□□□ 0
Sox3P53784 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC15.07■□□□□ 0
Sox3P53784 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC15.07■□□□□ 0
Sox3P53784 Gm45683-201ENSMUST00000210825 1247 ntBASIC15.07■□□□□ 0
Sox3P53784 AC158982.1-201ENSMUST00000228377 901 ntBASIC15.07■□□□□ 0
Sox3P53784 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Sox3P53784 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sox3P53784 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sox3P53784 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Sox3P53784 Gm15590-201ENSMUST00000078419 552 ntBASIC15.07■□□□□ 0
Sox3P53784 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC15.07■□□□□ 0
Sox3P53784 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sox3P53784 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
Sox3P53784 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sox3P53784 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC15.07■□□□□ 0
Sox3P53784 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC15.07■□□□□ 0
Sox3P53784 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC15.07■□□□□ 0
Sox3P53784 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sox3P53784 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sox3P53784 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sox3P53784 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC15.06■□□□□ 0
Sox3P53784 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Sox3P53784 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Sox3P53784 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sox3P53784 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Sox3P53784 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC15.06■□□□□ 0
Sox3P53784 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Sox3P53784 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sox3P53784 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC15.06■□□□□ 0
Sox3P53784 AL590614.2-201ENSMUST00000225374 1937 ntBASIC15.06■□□□□ 0
Sox3P53784 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Sox3P53784 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Sox3P53784 Gm25990-201ENSMUST00000102440 86 ntBASIC15.06■□□□□ 0
Sox3P53784 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sox3P53784 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Sox3P53784 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC15.06■□□□□ 0
Sox3P53784 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC15.06■□□□□ 0
Sox3P53784 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Sox3P53784 Rbfox2-207ENSMUST00000227533 1041 ntBASIC15.06■□□□□ 0
Sox3P53784 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC15.06■□□□□ 0
Sox3P53784 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sox3P53784 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sox3P53784 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Sox3P53784 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sox3P53784 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC15.06■□□□□ 0
Sox3P53784 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sox3P53784 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sox3P53784 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sox3P53784 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC15.06■□□□□ 0
Sox3P53784 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
Sox3P53784 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Sox3P53784 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
Sox3P53784 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Sox3P53784 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
Sox3P53784 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
Sox3P53784 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Sox3P53784 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Sox3P53784 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Sox3P53784 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Sox3P53784 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Sox3P53784 Gm25911-201ENSMUST00000157621 56 ntBASIC15.05■□□□□ -0
Sox3P53784 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Sox3P53784 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Sox3P53784 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Sox3P53784 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Sox3P53784 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC15.05■□□□□ -0
Sox3P53784 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Sox3P53784 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC15.05■□□□□ -0
Sox3P53784 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Sox3P53784 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Sox3P53784 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Sox3P53784 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Sox3P53784 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Sox3P53784 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Sox3P53784 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Sox3P53784 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Sox3P53784 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Sox3P53784 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Sox3P53784 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Sox3P53784 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Sox3P53784 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Sox3P53784 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sox3P53784 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
Sox3P53784 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms