Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Nkx2-1P50220 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Nkx2-1P50220 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
Nkx2-1P50220 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Nkx2-1P50220 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Nkx2-1P50220 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Nkx2-1P50220 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Nkx2-1P50220 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nkx2-1P50220 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC13.08□□□□□ -0.32
Nkx2-1P50220 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC13.08□□□□□ -0.32
Nkx2-1P50220 Gm32996-201ENSMUST00000199828 1447 ntBASIC13.08□□□□□ -0.32
Nkx2-1P50220 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Nkx2-1P50220 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nkx2-1P50220 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC13.08□□□□□ -0.32
Nkx2-1P50220 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC13.08□□□□□ -0.32
Nkx2-1P50220 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nkx2-1P50220 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Nkx2-1P50220 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC13.08□□□□□ -0.32
Nkx2-1P50220 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC13.08□□□□□ -0.32
Nkx2-1P50220 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC13.08□□□□□ -0.32
Nkx2-1P50220 AC112142.1-201ENSMUST00000228796 918 ntBASIC13.08□□□□□ -0.32
Nkx2-1P50220 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nkx2-1P50220 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nkx2-1P50220 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nkx2-1P50220 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
Nkx2-1P50220 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nkx2-1P50220 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Nkx2-1P50220 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Nkx2-1P50220 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nkx2-1P50220 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Nkx2-1P50220 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nkx2-1P50220 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nkx2-1P50220 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nkx2-1P50220 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC13.08□□□□□ -0.32
Nkx2-1P50220 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Nkx2-1P50220 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Nkx2-1P50220 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Nkx2-1P50220 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nkx2-1P50220 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nkx2-1P50220 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nkx2-1P50220 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Nkx2-1P50220 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nkx2-1P50220 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nkx2-1P50220 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Nkx2-1P50220 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC13.07□□□□□ -0.32
Nkx2-1P50220 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC13.07□□□□□ -0.32
Nkx2-1P50220 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC13.07□□□□□ -0.32
Nkx2-1P50220 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nkx2-1P50220 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC13.07□□□□□ -0.32
Nkx2-1P50220 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Nkx2-1P50220 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nkx2-1P50220 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nkx2-1P50220 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Nkx2-1P50220 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nkx2-1P50220 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nkx2-1P50220 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nkx2-1P50220 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC13.07□□□□□ -0.32
Nkx2-1P50220 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nkx2-1P50220 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nkx2-1P50220 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nkx2-1P50220 Tfap2a-203ENSMUST00000223869 2037 ntBASIC13.06□□□□□ -0.32
Nkx2-1P50220 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nkx2-1P50220 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nkx2-1P50220 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Nkx2-1P50220 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nkx2-1P50220 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Nkx2-1P50220 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nkx2-1P50220 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nkx2-1P50220 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Nkx2-1P50220 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Nkx2-1P50220 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC13.06□□□□□ -0.32
Nkx2-1P50220 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC13.06□□□□□ -0.32
Nkx2-1P50220 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC13.06□□□□□ -0.32
Nkx2-1P50220 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Nkx2-1P50220 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Nkx2-1P50220 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nkx2-1P50220 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC13.06□□□□□ -0.32
Nkx2-1P50220 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nkx2-1P50220 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Nkx2-1P50220 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nkx2-1P50220 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nkx2-1P50220 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Nkx2-1P50220 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Nkx2-1P50220 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nkx2-1P50220 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nkx2-1P50220 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nkx2-1P50220 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC13.06□□□□□ -0.32
Nkx2-1P50220 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Nkx2-1P50220 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC13.05□□□□□ -0.32
Nkx2-1P50220 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Nkx2-1P50220 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nkx2-1P50220 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC13.05□□□□□ -0.32
Nkx2-1P50220 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nkx2-1P50220 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nkx2-1P50220 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Nkx2-1P50220 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC13.05□□□□□ -0.32
Nkx2-1P50220 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nkx2-1P50220 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nkx2-1P50220 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC13.05□□□□□ -0.32
Nkx2-1P50220 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms