Protein–RNA interactions for Protein: P43407

Sdc2, Syndecan-2, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc2P43407 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sdc2P43407 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sdc2P43407 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Sdc2P43407 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sdc2P43407 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sdc2P43407 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Sdc2P43407 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
Sdc2P43407 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Sdc2P43407 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC17.68■□□□□ 0.42
Sdc2P43407 Gm6345-202ENSMUST00000180900 204 ntBASIC17.68■□□□□ 0.42
Sdc2P43407 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC17.68■□□□□ 0.42
Sdc2P43407 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Sdc2P43407 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC17.68■□□□□ 0.42
Sdc2P43407 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Sdc2P43407 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sdc2P43407 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sdc2P43407 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sdc2P43407 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sdc2P43407 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sdc2P43407 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sdc2P43407 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sdc2P43407 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC17.67■□□□□ 0.42
Sdc2P43407 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sdc2P43407 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sdc2P43407 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Sdc2P43407 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sdc2P43407 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sdc2P43407 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Sdc2P43407 Ptprs-211ENSMUST00000223859 5588 ntBASIC17.67■□□□□ 0.42
Sdc2P43407 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sdc2P43407 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Sdc2P43407 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Sdc2P43407 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sdc2P43407 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Sdc2P43407 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC17.67■□□□□ 0.42
Sdc2P43407 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
Sdc2P43407 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Sdc2P43407 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sdc2P43407 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Sdc2P43407 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC17.67■□□□□ 0.42
Sdc2P43407 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sdc2P43407 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sdc2P43407 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Sdc2P43407 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sdc2P43407 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Sdc2P43407 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sdc2P43407 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sdc2P43407 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Sdc2P43407 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
Sdc2P43407 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sdc2P43407 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Sdc2P43407 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sdc2P43407 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC17.66■□□□□ 0.42
Sdc2P43407 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sdc2P43407 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sdc2P43407 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Sdc2P43407 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sdc2P43407 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sdc2P43407 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sdc2P43407 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Sdc2P43407 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Sdc2P43407 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC17.66■□□□□ 0.42
Sdc2P43407 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sdc2P43407 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sdc2P43407 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Sdc2P43407 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sdc2P43407 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sdc2P43407 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sdc2P43407 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sdc2P43407 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Sdc2P43407 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC17.65■□□□□ 0.42
Sdc2P43407 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sdc2P43407 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sdc2P43407 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC17.65■□□□□ 0.42
Sdc2P43407 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Sdc2P43407 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sdc2P43407 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sdc2P43407 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sdc2P43407 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sdc2P43407 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sdc2P43407 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Sdc2P43407 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sdc2P43407 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sdc2P43407 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sdc2P43407 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sdc2P43407 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sdc2P43407 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sdc2P43407 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sdc2P43407 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sdc2P43407 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Sdc2P43407 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sdc2P43407 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Sdc2P43407 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Sdc2P43407 Gm8258-201ENSMUST00000055593 1449 ntBASIC17.64■□□□□ 0.42
Sdc2P43407 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sdc2P43407 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC17.64■□□□□ 0.41
Sdc2P43407 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sdc2P43407 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC17.64■□□□□ 0.41
Sdc2P43407 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Sdc2P43407 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms