Protein–RNA interactions for Protein: P41778

Pbx1, Pre-B-cell leukemia transcription factor 1, mousemouse

Predictions only

Length 430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pbx1P41778 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pbx1P41778 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Pbx1P41778 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
Pbx1P41778 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Pbx1P41778 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Pbx1P41778 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.3
Pbx1P41778 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pbx1P41778 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pbx1P41778 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pbx1P41778 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Pbx1P41778 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Pbx1P41778 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pbx1P41778 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pbx1P41778 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pbx1P41778 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pbx1P41778 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC16.95■□□□□ 0.3
Pbx1P41778 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC16.95■□□□□ 0.3
Pbx1P41778 Gm5587-201ENSMUST00000206270 674 ntBASIC16.95■□□□□ 0.3
Pbx1P41778 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC16.95■□□□□ 0.3
Pbx1P41778 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pbx1P41778 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pbx1P41778 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pbx1P41778 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pbx1P41778 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pbx1P41778 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pbx1P41778 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pbx1P41778 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pbx1P41778 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Pbx1P41778 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Pbx1P41778 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Pbx1P41778 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Pbx1P41778 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pbx1P41778 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Pbx1P41778 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Pbx1P41778 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pbx1P41778 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pbx1P41778 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pbx1P41778 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pbx1P41778 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Pbx1P41778 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pbx1P41778 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pbx1P41778 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Pbx1P41778 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Pbx1P41778 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC16.94■□□□□ 0.3
Pbx1P41778 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pbx1P41778 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Pbx1P41778 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Pbx1P41778 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pbx1P41778 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pbx1P41778 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pbx1P41778 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Pbx1P41778 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pbx1P41778 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pbx1P41778 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pbx1P41778 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC16.94■□□□□ 0.3
Pbx1P41778 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pbx1P41778 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pbx1P41778 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pbx1P41778 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pbx1P41778 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pbx1P41778 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC16.94■□□□□ 0.3
Pbx1P41778 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pbx1P41778 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Pbx1P41778 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pbx1P41778 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pbx1P41778 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Pbx1P41778 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pbx1P41778 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pbx1P41778 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pbx1P41778 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pbx1P41778 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pbx1P41778 Gm43352-201ENSMUST00000196419 3065 ntBASIC16.93■□□□□ 0.3
Pbx1P41778 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pbx1P41778 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pbx1P41778 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pbx1P41778 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pbx1P41778 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC16.93■□□□□ 0.3
Pbx1P41778 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pbx1P41778 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Pbx1P41778 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Pbx1P41778 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Pbx1P41778 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pbx1P41778 Gm13312-201ENSMUST00000119631 718 ntBASIC16.93■□□□□ 0.3
Pbx1P41778 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Pbx1P41778 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pbx1P41778 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC16.93■□□□□ 0.3
Pbx1P41778 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pbx1P41778 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Pbx1P41778 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Pbx1P41778 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pbx1P41778 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pbx1P41778 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Pbx1P41778 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Pbx1P41778 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pbx1P41778 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Pbx1P41778 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pbx1P41778 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Pbx1P41778 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Pbx1P41778 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC16.92■□□□□ 0.3
Pbx1P41778 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms