Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Slc6a1P31648 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC13.59□□□□□ -0.23
Slc6a1P31648 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
Slc6a1P31648 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Slc6a1P31648 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Slc6a1P31648 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Slc6a1P31648 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Slc6a1P31648 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Slc6a1P31648 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Slc6a1P31648 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Slc6a1P31648 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Slc6a1P31648 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Slc6a1P31648 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Slc6a1P31648 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Slc6a1P31648 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
Slc6a1P31648 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Slc6a1P31648 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Slc6a1P31648 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Slc6a1P31648 Gm15565-201ENSMUST00000118890 427 ntBASIC13.58□□□□□ -0.24
Slc6a1P31648 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Slc6a1P31648 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Slc6a1P31648 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC13.58□□□□□ -0.24
Slc6a1P31648 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC13.58□□□□□ -0.24
Slc6a1P31648 Gm7977-201ENSMUST00000193787 748 ntBASIC13.58□□□□□ -0.24
Slc6a1P31648 Gm29994-201ENSMUST00000195495 1193 ntBASIC13.58□□□□□ -0.24
Slc6a1P31648 Gm30025-201ENSMUST00000218555 728 ntBASIC13.58□□□□□ -0.24
Slc6a1P31648 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC13.58□□□□□ -0.24
Slc6a1P31648 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Slc6a1P31648 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC13.58□□□□□ -0.24
Slc6a1P31648 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Slc6a1P31648 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Slc6a1P31648 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Slc6a1P31648 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Slc6a1P31648 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Slc6a1P31648 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Slc6a1P31648 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Slc6a1P31648 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Slc6a1P31648 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Slc6a1P31648 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Slc6a1P31648 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC13.58□□□□□ -0.24
Slc6a1P31648 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Slc6a1P31648 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Slc6a1P31648 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Slc6a1P31648 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Slc6a1P31648 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Slc6a1P31648 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Slc6a1P31648 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Slc6a1P31648 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Slc6a1P31648 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Slc6a1P31648 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC13.57□□□□□ -0.24
Slc6a1P31648 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Slc6a1P31648 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Slc6a1P31648 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Slc6a1P31648 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Slc6a1P31648 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Slc6a1P31648 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC13.57□□□□□ -0.24
Slc6a1P31648 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Slc6a1P31648 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC13.57□□□□□ -0.24
Slc6a1P31648 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Slc6a1P31648 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Slc6a1P31648 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Slc6a1P31648 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Slc6a1P31648 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Slc6a1P31648 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Slc6a1P31648 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Slc6a1P31648 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Slc6a1P31648 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC13.57□□□□□ -0.24
Slc6a1P31648 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Slc6a1P31648 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Slc6a1P31648 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Slc6a1P31648 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Slc6a1P31648 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Slc6a1P31648 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Slc6a1P31648 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Slc6a1P31648 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Slc6a1P31648 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Slc6a1P31648 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC13.56□□□□□ -0.24
Slc6a1P31648 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Slc6a1P31648 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Slc6a1P31648 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Slc6a1P31648 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Slc6a1P31648 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Slc6a1P31648 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Slc6a1P31648 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Slc6a1P31648 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Slc6a1P31648 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Slc6a1P31648 Gm38327-201ENSMUST00000195852 1755 ntBASIC13.56□□□□□ -0.24
Slc6a1P31648 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Slc6a1P31648 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Slc6a1P31648 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC13.56□□□□□ -0.24
Slc6a1P31648 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Slc6a1P31648 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Slc6a1P31648 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Slc6a1P31648 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Slc6a1P31648 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Slc6a1P31648 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Slc6a1P31648 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Slc6a1P31648 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Slc6a1P31648 Gm44443-201ENSMUST00000204396 5633 ntBASIC13.56□□□□□ -0.24
Slc6a1P31648 AC167013.2-201ENSMUST00000228520 2684 ntBASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms