Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
RxrbP28704 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
RxrbP28704 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
RxrbP28704 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
RxrbP28704 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC15.83■□□□□ 0.12
RxrbP28704 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RxrbP28704 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RxrbP28704 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RxrbP28704 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RxrbP28704 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RxrbP28704 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RxrbP28704 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
RxrbP28704 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC15.83■□□□□ 0.12
RxrbP28704 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC15.83■□□□□ 0.12
RxrbP28704 Gm29707-201ENSMUST00000196325 491 ntBASIC15.83■□□□□ 0.12
RxrbP28704 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
RxrbP28704 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RxrbP28704 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RxrbP28704 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC15.83■□□□□ 0.12
RxrbP28704 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RxrbP28704 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RxrbP28704 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RxrbP28704 Gm8784-201ENSMUST00000222096 1435 ntBASIC15.83■□□□□ 0.12
RxrbP28704 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RxrbP28704 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RxrbP28704 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RxrbP28704 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RxrbP28704 Gm37305-201ENSMUST00000195714 4279 ntBASIC15.82■□□□□ 0.12
RxrbP28704 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RxrbP28704 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RxrbP28704 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RxrbP28704 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RxrbP28704 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC15.82■□□□□ 0.12
RxrbP28704 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RxrbP28704 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
RxrbP28704 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
RxrbP28704 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RxrbP28704 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
RxrbP28704 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RxrbP28704 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RxrbP28704 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
RxrbP28704 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
RxrbP28704 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC15.82■□□□□ 0.12
RxrbP28704 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC15.82■□□□□ 0.12
RxrbP28704 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC15.82■□□□□ 0.12
RxrbP28704 Gm37055-201ENSMUST00000191866 133 ntBASIC15.82■□□□□ 0.12
RxrbP28704 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC15.82■□□□□ 0.12
RxrbP28704 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RxrbP28704 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
RxrbP28704 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RxrbP28704 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RxrbP28704 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RxrbP28704 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
RxrbP28704 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RxrbP28704 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
RxrbP28704 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RxrbP28704 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
RxrbP28704 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RxrbP28704 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
RxrbP28704 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RxrbP28704 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
RxrbP28704 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
RxrbP28704 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
RxrbP28704 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RxrbP28704 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RxrbP28704 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RxrbP28704 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RxrbP28704 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC15.81■□□□□ 0.12
RxrbP28704 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
RxrbP28704 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
RxrbP28704 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RxrbP28704 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RxrbP28704 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RxrbP28704 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
RxrbP28704 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RxrbP28704 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RxrbP28704 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RxrbP28704 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
RxrbP28704 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
RxrbP28704 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
RxrbP28704 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC15.81■□□□□ 0.12
RxrbP28704 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RxrbP28704 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RxrbP28704 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
RxrbP28704 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RxrbP28704 Camk2g-217ENSMUST00000226630 1937 ntBASIC15.8■□□□□ 0.12
RxrbP28704 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RxrbP28704 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
RxrbP28704 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RxrbP28704 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RxrbP28704 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RxrbP28704 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RxrbP28704 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
RxrbP28704 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
RxrbP28704 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
RxrbP28704 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC15.8■□□□□ 0.12
RxrbP28704 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC15.8■□□□□ 0.12
RxrbP28704 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RxrbP28704 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RxrbP28704 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms