Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col2a1P28481 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.7■□□□□ 0.42
Col2a1P28481 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Col2a1P28481 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col2a1P28481 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Col2a1P28481 Rprl2-201ENSMUST00000157150 290 ntBASIC17.7■□□□□ 0.42
Col2a1P28481 Mir6990-201ENSMUST00000183724 91 ntBASIC17.7■□□□□ 0.42
Col2a1P28481 CT025555.1-201ENSMUST00000225901 1217 ntBASIC17.7■□□□□ 0.42
Col2a1P28481 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
Col2a1P28481 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col2a1P28481 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Col2a1P28481 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Col2a1P28481 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Col2a1P28481 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col2a1P28481 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col2a1P28481 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col2a1P28481 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Col2a1P28481 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Col2a1P28481 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Col2a1P28481 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC17.7■□□□□ 0.42
Col2a1P28481 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC17.7■□□□□ 0.42
Col2a1P28481 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col2a1P28481 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Col2a1P28481 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Col2a1P28481 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Col2a1P28481 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col2a1P28481 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Col2a1P28481 Gm13365-201ENSMUST00000121188 973 ntBASIC17.69■□□□□ 0.42
Col2a1P28481 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC17.69■□□□□ 0.42
Col2a1P28481 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC17.69■□□□□ 0.42
Col2a1P28481 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC17.69■□□□□ 0.42
Col2a1P28481 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC17.69■□□□□ 0.42
Col2a1P28481 Gm10154-201ENSMUST00000084445 354 ntBASIC17.69■□□□□ 0.42
Col2a1P28481 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Col2a1P28481 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Col2a1P28481 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Col2a1P28481 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Col2a1P28481 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Col2a1P28481 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Col2a1P28481 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Col2a1P28481 Gm14701-201ENSMUST00000117156 348 ntBASIC17.69■□□□□ 0.42
Col2a1P28481 Gm44335-201ENSMUST00000196879 141 ntBASIC17.69■□□□□ 0.42
Col2a1P28481 Gm44297-201ENSMUST00000198304 141 ntBASIC17.69■□□□□ 0.42
Col2a1P28481 Gm44346-201ENSMUST00000198851 141 ntBASIC17.69■□□□□ 0.42
Col2a1P28481 Gm5312-201ENSMUST00000203728 547 ntBASIC17.69■□□□□ 0.42
Col2a1P28481 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC17.69■□□□□ 0.42
Col2a1P28481 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
Col2a1P28481 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Col2a1P28481 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC17.69■□□□□ 0.42
Col2a1P28481 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col2a1P28481 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Col2a1P28481 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col2a1P28481 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col2a1P28481 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col2a1P28481 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Col2a1P28481 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col2a1P28481 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col2a1P28481 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
Col2a1P28481 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Col2a1P28481 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col2a1P28481 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col2a1P28481 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC17.68■□□□□ 0.42
Col2a1P28481 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC17.68■□□□□ 0.42
Col2a1P28481 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Col2a1P28481 Gm18889-201ENSMUST00000174284 929 ntBASIC17.68■□□□□ 0.42
Col2a1P28481 Gm43125-201ENSMUST00000201724 730 ntBASIC17.68■□□□□ 0.42
Col2a1P28481 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC17.68■□□□□ 0.42
Col2a1P28481 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC17.68■□□□□ 0.42
Col2a1P28481 AC154621.1-201ENSMUST00000226155 1119 ntBASIC17.68■□□□□ 0.42
Col2a1P28481 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Col2a1P28481 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col2a1P28481 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col2a1P28481 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
Col2a1P28481 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col2a1P28481 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col2a1P28481 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col2a1P28481 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col2a1P28481 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.67■□□□□ 0.42
Col2a1P28481 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC17.67■□□□□ 0.42
Col2a1P28481 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col2a1P28481 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Col2a1P28481 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col2a1P28481 Gm15920-201ENSMUST00000118998 402 ntBASIC17.67■□□□□ 0.42
Col2a1P28481 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Col2a1P28481 Gm37171-201ENSMUST00000192636 1185 ntBASIC17.67■□□□□ 0.42
Col2a1P28481 CT030684.1-201ENSMUST00000227292 914 ntBASIC17.67■□□□□ 0.42
Col2a1P28481 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
Col2a1P28481 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col2a1P28481 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col2a1P28481 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col2a1P28481 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col2a1P28481 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Col2a1P28481 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col2a1P28481 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Col2a1P28481 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col2a1P28481 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col2a1P28481 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col2a1P28481 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col2a1P28481 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col2a1P28481 Nudt18-203ENSMUST00000228768 1578 ntBASIC17.66■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms