Protein–RNA interactions for Protein: P27664

Pde6a, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6aP27664 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Pde6aP27664 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pde6aP27664 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC18.24■□□□□ 0.51
Pde6aP27664 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Pde6aP27664 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC18.24■□□□□ 0.51
Pde6aP27664 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pde6aP27664 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Pde6aP27664 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Pde6aP27664 Grk6-207ENSMUST00000225925 2769 ntBASIC18.24■□□□□ 0.51
Pde6aP27664 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pde6aP27664 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pde6aP27664 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC18.24■□□□□ 0.51
Pde6aP27664 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
Pde6aP27664 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Pde6aP27664 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Pde6aP27664 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC18.24■□□□□ 0.51
Pde6aP27664 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC18.24■□□□□ 0.51
Pde6aP27664 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Pde6aP27664 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC18.24■□□□□ 0.51
Pde6aP27664 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC18.24■□□□□ 0.51
Pde6aP27664 AC159106.1-201ENSMUST00000224421 690 ntBASIC18.24■□□□□ 0.51
Pde6aP27664 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Pde6aP27664 Gm18856-201ENSMUST00000178096 1374 ntBASIC18.24■□□□□ 0.51
Pde6aP27664 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Pde6aP27664 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pde6aP27664 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Pde6aP27664 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Pde6aP27664 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Pde6aP27664 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Pde6aP27664 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pde6aP27664 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pde6aP27664 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
Pde6aP27664 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pde6aP27664 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Pde6aP27664 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Pde6aP27664 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Pde6aP27664 Gm7862-201ENSMUST00000121461 292 ntBASIC18.23■□□□□ 0.51
Pde6aP27664 Gm28659-201ENSMUST00000188013 759 ntBASIC18.23■□□□□ 0.51
Pde6aP27664 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Pde6aP27664 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC18.23■□□□□ 0.51
Pde6aP27664 Gm19164-201ENSMUST00000210667 640 ntBASIC18.23■□□□□ 0.51
Pde6aP27664 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pde6aP27664 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pde6aP27664 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Pde6aP27664 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pde6aP27664 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pde6aP27664 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pde6aP27664 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Pde6aP27664 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pde6aP27664 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pde6aP27664 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pde6aP27664 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC18.22■□□□□ 0.51
Pde6aP27664 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pde6aP27664 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Pde6aP27664 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pde6aP27664 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
Pde6aP27664 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Pde6aP27664 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC18.22■□□□□ 0.51
Pde6aP27664 AC093926.2-201ENSMUST00000214468 1228 ntBASIC18.22■□□□□ 0.51
Pde6aP27664 AC164629.2-201ENSMUST00000217916 270 ntBASIC18.22■□□□□ 0.51
Pde6aP27664 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pde6aP27664 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Pde6aP27664 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pde6aP27664 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pde6aP27664 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pde6aP27664 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pde6aP27664 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC18.21■□□□□ 0.51
Pde6aP27664 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pde6aP27664 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pde6aP27664 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Pde6aP27664 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pde6aP27664 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Pde6aP27664 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pde6aP27664 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pde6aP27664 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC18.21■□□□□ 0.51
Pde6aP27664 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Pde6aP27664 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pde6aP27664 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
Pde6aP27664 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pde6aP27664 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pde6aP27664 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
Pde6aP27664 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pde6aP27664 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Pde6aP27664 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pde6aP27664 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC18.21■□□□□ 0.51
Pde6aP27664 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
Pde6aP27664 Gm6089-201ENSMUST00000197666 938 ntBASIC18.21■□□□□ 0.51
Pde6aP27664 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pde6aP27664 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pde6aP27664 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pde6aP27664 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pde6aP27664 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pde6aP27664 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pde6aP27664 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pde6aP27664 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Pde6aP27664 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Pde6aP27664 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Pde6aP27664 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pde6aP27664 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pde6aP27664 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms