Protein–RNA interactions for Protein: P21107

Tpm3, Tropomyosin alpha-3 chain, mousemouse

Known RBP Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm3P21107 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tpm3P21107 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tpm3P21107 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tpm3P21107 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Tpm3P21107 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
Tpm3P21107 Gm15378-201ENSMUST00000121894 207 ntBASIC17.68■□□□□ 0.42
Tpm3P21107 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC17.68■□□□□ 0.42
Tpm3P21107 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC17.68■□□□□ 0.42
Tpm3P21107 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tpm3P21107 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tpm3P21107 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tpm3P21107 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tpm3P21107 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tpm3P21107 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Tpm3P21107 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tpm3P21107 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Tpm3P21107 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Tpm3P21107 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tpm3P21107 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tpm3P21107 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tpm3P21107 Gm37305-201ENSMUST00000195714 4279 ntBASIC17.67■□□□□ 0.42
Tpm3P21107 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC17.67■□□□□ 0.42
Tpm3P21107 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Tpm3P21107 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tpm3P21107 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tpm3P21107 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tpm3P21107 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tpm3P21107 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC17.67■□□□□ 0.42
Tpm3P21107 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tpm3P21107 Gm45133-201ENSMUST00000207548 2773 ntBASIC17.67■□□□□ 0.42
Tpm3P21107 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tpm3P21107 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC17.67■□□□□ 0.42
Tpm3P21107 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Tpm3P21107 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC17.67■□□□□ 0.42
Tpm3P21107 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Tpm3P21107 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tpm3P21107 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC17.67■□□□□ 0.42
Tpm3P21107 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Tpm3P21107 AC154855.1-201ENSMUST00000227353 1458 ntBASIC17.67■□□□□ 0.42
Tpm3P21107 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tpm3P21107 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Tpm3P21107 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Tpm3P21107 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tpm3P21107 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC17.67■□□□□ 0.42
Tpm3P21107 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tpm3P21107 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tpm3P21107 Zfp264-201ENSMUST00000208656 1563 ntBASIC17.66■□□□□ 0.42
Tpm3P21107 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tpm3P21107 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Tpm3P21107 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tpm3P21107 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tpm3P21107 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Tpm3P21107 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tpm3P21107 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Tpm3P21107 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tpm3P21107 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Tpm3P21107 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC17.66■□□□□ 0.42
Tpm3P21107 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tpm3P21107 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC17.66■□□□□ 0.42
Tpm3P21107 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tpm3P21107 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tpm3P21107 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tpm3P21107 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tpm3P21107 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tpm3P21107 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tpm3P21107 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Tpm3P21107 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tpm3P21107 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Tpm3P21107 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tpm3P21107 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tpm3P21107 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tpm3P21107 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC17.65■□□□□ 0.42
Tpm3P21107 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tpm3P21107 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tpm3P21107 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tpm3P21107 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tpm3P21107 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Tpm3P21107 Gm45546-201ENSMUST00000211053 2394 ntBASIC17.65■□□□□ 0.42
Tpm3P21107 Gm13186-201ENSMUST00000118031 316 ntBASIC17.65■□□□□ 0.42
Tpm3P21107 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tpm3P21107 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tpm3P21107 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Tpm3P21107 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Tpm3P21107 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tpm3P21107 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Tpm3P21107 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tpm3P21107 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tpm3P21107 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tpm3P21107 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC17.65■□□□□ 0.42
Tpm3P21107 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tpm3P21107 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Tpm3P21107 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.42
Tpm3P21107 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tpm3P21107 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tpm3P21107 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tpm3P21107 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tpm3P21107 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tpm3P21107 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tpm3P21107 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tpm3P21107 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms