Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Sdc1P18828 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sdc1P18828 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sdc1P18828 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Sdc1P18828 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Sdc1P18828 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sdc1P18828 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sdc1P18828 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
Sdc1P18828 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sdc1P18828 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Sdc1P18828 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC12.96□□□□□ -0.33
Sdc1P18828 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC12.96□□□□□ -0.33
Sdc1P18828 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sdc1P18828 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Sdc1P18828 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC12.96□□□□□ -0.33
Sdc1P18828 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sdc1P18828 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC12.96□□□□□ -0.33
Sdc1P18828 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC12.96□□□□□ -0.33
Sdc1P18828 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sdc1P18828 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Sdc1P18828 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Sdc1P18828 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sdc1P18828 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sdc1P18828 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Sdc1P18828 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Sdc1P18828 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Sdc1P18828 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Sdc1P18828 Gm11839-201ENSMUST00000120647 1953 ntBASIC12.96□□□□□ -0.34
Sdc1P18828 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Sdc1P18828 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Sdc1P18828 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Sdc1P18828 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
Sdc1P18828 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Sdc1P18828 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Sdc1P18828 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Sdc1P18828 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC12.95□□□□□ -0.34
Sdc1P18828 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sdc1P18828 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sdc1P18828 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sdc1P18828 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sdc1P18828 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sdc1P18828 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Sdc1P18828 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Sdc1P18828 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Sdc1P18828 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sdc1P18828 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sdc1P18828 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sdc1P18828 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Sdc1P18828 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sdc1P18828 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sdc1P18828 Gm10605-202ENSMUST00000183019 3198 ntBASIC12.95□□□□□ -0.34
Sdc1P18828 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sdc1P18828 Gm7290-201ENSMUST00000104990 617 ntBASIC12.95□□□□□ -0.34
Sdc1P18828 Gm12918-201ENSMUST00000120234 636 ntBASIC12.95□□□□□ -0.34
Sdc1P18828 Gm15710-201ENSMUST00000121821 636 ntBASIC12.95□□□□□ -0.34
Sdc1P18828 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC12.95□□□□□ -0.34
Sdc1P18828 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Sdc1P18828 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sdc1P18828 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Sdc1P18828 Gm5075-201ENSMUST00000196916 622 ntBASIC12.95□□□□□ -0.34
Sdc1P18828 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC12.95□□□□□ -0.34
Sdc1P18828 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
Sdc1P18828 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sdc1P18828 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC12.95□□□□□ -0.34
Sdc1P18828 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC12.95□□□□□ -0.34
Sdc1P18828 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Sdc1P18828 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sdc1P18828 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Sdc1P18828 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sdc1P18828 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sdc1P18828 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
Sdc1P18828 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sdc1P18828 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sdc1P18828 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC12.95□□□□□ -0.34
Sdc1P18828 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sdc1P18828 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sdc1P18828 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sdc1P18828 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sdc1P18828 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Sdc1P18828 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC12.94□□□□□ -0.34
Sdc1P18828 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sdc1P18828 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC12.94□□□□□ -0.34
Sdc1P18828 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC12.94□□□□□ -0.34
Sdc1P18828 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Sdc1P18828 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC12.94□□□□□ -0.34
Sdc1P18828 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC12.94□□□□□ -0.34
Sdc1P18828 Gm18958-201ENSMUST00000174258 762 ntBASIC12.94□□□□□ -0.34
Sdc1P18828 Gm9694-201ENSMUST00000193347 1189 ntBASIC12.94□□□□□ -0.34
Sdc1P18828 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sdc1P18828 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sdc1P18828 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sdc1P18828 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sdc1P18828 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sdc1P18828 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Sdc1P18828 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sdc1P18828 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Sdc1P18828 Ap5m1-205ENSMUST00000227431 3757 ntBASIC12.94□□□□□ -0.34
Sdc1P18828 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Sdc1P18828 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sdc1P18828 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms