Protein–RNA interactions for Protein: P01572

Ifna1, Interferon alpha-1, mousemouse

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ifna1P01572 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ifna1P01572 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ifna1P01572 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ifna1P01572 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ifna1P01572 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ifna1P01572 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ifna1P01572 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ifna1P01572 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ifna1P01572 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC13.31□□□□□ -0.28
Ifna1P01572 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ifna1P01572 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ifna1P01572 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Ifna1P01572 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ifna1P01572 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ifna1P01572 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Ifna1P01572 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ifna1P01572 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ifna1P01572 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ifna1P01572 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ifna1P01572 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ifna1P01572 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ifna1P01572 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ifna1P01572 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ifna1P01572 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Ifna1P01572 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ifna1P01572 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Ifna1P01572 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ifna1P01572 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ifna1P01572 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ifna1P01572 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ifna1P01572 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ifna1P01572 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC13.3□□□□□ -0.28
Ifna1P01572 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC13.3□□□□□ -0.28
Ifna1P01572 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Ifna1P01572 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ifna1P01572 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ifna1P01572 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ifna1P01572 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ifna1P01572 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
Ifna1P01572 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC13.3□□□□□ -0.28
Ifna1P01572 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ifna1P01572 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ifna1P01572 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ifna1P01572 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ifna1P01572 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Ifna1P01572 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ifna1P01572 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC13.3□□□□□ -0.28
Ifna1P01572 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ifna1P01572 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ifna1P01572 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ifna1P01572 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ifna1P01572 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ifna1P01572 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ifna1P01572 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC13.3□□□□□ -0.28
Ifna1P01572 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ifna1P01572 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ifna1P01572 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ifna1P01572 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ifna1P01572 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ifna1P01572 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ifna1P01572 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC13.29□□□□□ -0.28
Ifna1P01572 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ifna1P01572 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ifna1P01572 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ifna1P01572 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ifna1P01572 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ifna1P01572 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ifna1P01572 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ifna1P01572 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ifna1P01572 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ifna1P01572 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ifna1P01572 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC13.29□□□□□ -0.28
Ifna1P01572 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Ifna1P01572 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC13.29□□□□□ -0.28
Ifna1P01572 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC13.29□□□□□ -0.28
Ifna1P01572 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ifna1P01572 Gm2274-201ENSMUST00000184539 609 ntBASIC13.29□□□□□ -0.28
Ifna1P01572 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ifna1P01572 Gm7213-201ENSMUST00000215977 950 ntBASIC13.29□□□□□ -0.28
Ifna1P01572 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC13.29□□□□□ -0.28
Ifna1P01572 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ifna1P01572 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC13.29□□□□□ -0.28
Ifna1P01572 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ifna1P01572 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Ifna1P01572 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ifna1P01572 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ifna1P01572 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ifna1P01572 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ifna1P01572 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ifna1P01572 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ifna1P01572 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ifna1P01572 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
Ifna1P01572 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ifna1P01572 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ifna1P01572 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ifna1P01572 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ifna1P01572 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ifna1P01572 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ifna1P01572 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ifna1P01572 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms