Protein–RNA interactions for Protein: O88890

Sh2d1a, SH2 domain-containing protein 1A, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d1aO88890 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC11.19□□□□□ -0.62
Sh2d1aO88890 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sh2d1aO88890 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sh2d1aO88890 Zkscan4-202ENSMUST00000225845 1506 ntBASIC11.19□□□□□ -0.62
Sh2d1aO88890 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sh2d1aO88890 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sh2d1aO88890 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC11.18□□□□□ -0.62
Sh2d1aO88890 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sh2d1aO88890 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sh2d1aO88890 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Sh2d1aO88890 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sh2d1aO88890 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sh2d1aO88890 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Sh2d1aO88890 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sh2d1aO88890 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sh2d1aO88890 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sh2d1aO88890 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sh2d1aO88890 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC11.18□□□□□ -0.62
Sh2d1aO88890 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sh2d1aO88890 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC11.18□□□□□ -0.62
Sh2d1aO88890 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC11.18□□□□□ -0.62
Sh2d1aO88890 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sh2d1aO88890 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Sh2d1aO88890 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Sh2d1aO88890 App-207ENSMUST00000227737 2827 ntBASIC11.18□□□□□ -0.62
Sh2d1aO88890 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sh2d1aO88890 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sh2d1aO88890 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sh2d1aO88890 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sh2d1aO88890 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
Sh2d1aO88890 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Sh2d1aO88890 Gm42901-201ENSMUST00000197735 3171 ntBASIC11.18□□□□□ -0.62
Sh2d1aO88890 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sh2d1aO88890 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC11.18□□□□□ -0.62
Sh2d1aO88890 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sh2d1aO88890 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Sh2d1aO88890 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC11.17□□□□□ -0.62
Sh2d1aO88890 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Sh2d1aO88890 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC11.17□□□□□ -0.62
Sh2d1aO88890 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sh2d1aO88890 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sh2d1aO88890 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC11.17□□□□□ -0.62
Sh2d1aO88890 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC11.17□□□□□ -0.62
Sh2d1aO88890 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sh2d1aO88890 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Sh2d1aO88890 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sh2d1aO88890 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Sh2d1aO88890 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sh2d1aO88890 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sh2d1aO88890 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sh2d1aO88890 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Sh2d1aO88890 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC11.17□□□□□ -0.62
Sh2d1aO88890 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Sh2d1aO88890 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sh2d1aO88890 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sh2d1aO88890 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sh2d1aO88890 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Sh2d1aO88890 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sh2d1aO88890 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sh2d1aO88890 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sh2d1aO88890 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sh2d1aO88890 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sh2d1aO88890 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sh2d1aO88890 AC153526.5-201ENSMUST00000218661 2147 ntBASIC11.17□□□□□ -0.62
Sh2d1aO88890 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sh2d1aO88890 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC11.17□□□□□ -0.62
Sh2d1aO88890 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sh2d1aO88890 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sh2d1aO88890 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sh2d1aO88890 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sh2d1aO88890 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sh2d1aO88890 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Sh2d1aO88890 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sh2d1aO88890 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Sh2d1aO88890 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
Sh2d1aO88890 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sh2d1aO88890 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sh2d1aO88890 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sh2d1aO88890 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sh2d1aO88890 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sh2d1aO88890 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sh2d1aO88890 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Sh2d1aO88890 Gm10052-201ENSMUST00000168019 960 ntBASIC11.16□□□□□ -0.62
Sh2d1aO88890 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC11.16□□□□□ -0.62
Sh2d1aO88890 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sh2d1aO88890 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Sh2d1aO88890 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sh2d1aO88890 Gm7729-201ENSMUST00000050143 801 ntBASIC11.16□□□□□ -0.62
Sh2d1aO88890 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sh2d1aO88890 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Sh2d1aO88890 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sh2d1aO88890 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Sh2d1aO88890 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sh2d1aO88890 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC11.16□□□□□ -0.62
Sh2d1aO88890 Ntrk2-205ENSMUST00000224402 2284 ntBASIC11.16□□□□□ -0.62
Sh2d1aO88890 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sh2d1aO88890 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sh2d1aO88890 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC11.16□□□□□ -0.62
Sh2d1aO88890 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sh2d1aO88890 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms