Protein–RNA interactions for Protein: O88705

Hcn3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn3O88705 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC15.12■□□□□ 0.01
Hcn3O88705 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hcn3O88705 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hcn3O88705 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Hcn3O88705 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC15.12■□□□□ 0.01
Hcn3O88705 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
Hcn3O88705 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Hcn3O88705 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hcn3O88705 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hcn3O88705 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hcn3O88705 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hcn3O88705 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hcn3O88705 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC15.11■□□□□ 0.01
Hcn3O88705 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hcn3O88705 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
Hcn3O88705 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hcn3O88705 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hcn3O88705 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Hcn3O88705 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hcn3O88705 Gm13186-201ENSMUST00000118031 316 ntBASIC15.11■□□□□ 0.01
Hcn3O88705 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC15.11■□□□□ 0.01
Hcn3O88705 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hcn3O88705 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Hcn3O88705 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Hcn3O88705 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC15.11■□□□□ 0.01
Hcn3O88705 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hcn3O88705 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hcn3O88705 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hcn3O88705 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hcn3O88705 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hcn3O88705 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hcn3O88705 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hcn3O88705 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hcn3O88705 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hcn3O88705 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hcn3O88705 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC15.1■□□□□ 0.01
Hcn3O88705 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hcn3O88705 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hcn3O88705 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hcn3O88705 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hcn3O88705 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hcn3O88705 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hcn3O88705 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC15.1■□□□□ 0.01
Hcn3O88705 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Hcn3O88705 Krtap5-1-202ENSMUST00000188274 742 ntBASIC15.1■□□□□ 0.01
Hcn3O88705 Gm36967-201ENSMUST00000193814 266 ntBASIC15.1■□□□□ 0.01
Hcn3O88705 AC153881.2-201ENSMUST00000214877 204 ntBASIC15.1■□□□□ 0.01
Hcn3O88705 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hcn3O88705 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Hcn3O88705 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hcn3O88705 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Hcn3O88705 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hcn3O88705 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hcn3O88705 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Hcn3O88705 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hcn3O88705 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hcn3O88705 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Hcn3O88705 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Hcn3O88705 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hcn3O88705 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Hcn3O88705 Sybu-209ENSMUST00000228639 4113 ntBASIC15.1■□□□□ 0.01
Hcn3O88705 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hcn3O88705 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hcn3O88705 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hcn3O88705 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Hcn3O88705 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hcn3O88705 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hcn3O88705 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Hcn3O88705 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Hcn3O88705 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC15.09■□□□□ 0.01
Hcn3O88705 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hcn3O88705 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Hcn3O88705 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hcn3O88705 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hcn3O88705 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hcn3O88705 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hcn3O88705 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hcn3O88705 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hcn3O88705 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Hcn3O88705 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hcn3O88705 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hcn3O88705 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC15.09■□□□□ 0.01
Hcn3O88705 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
Hcn3O88705 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC15.09■□□□□ 0.01
Hcn3O88705 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
Hcn3O88705 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Hcn3O88705 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC15.08■□□□□ 0
Hcn3O88705 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC15.08■□□□□ 0
Hcn3O88705 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Hcn3O88705 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Hcn3O88705 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC15.08■□□□□ 0
Hcn3O88705 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC15.08■□□□□ 0
Hcn3O88705 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC15.08■□□□□ 0
Hcn3O88705 Gm4217-201ENSMUST00000182243 1002 ntBASIC15.08■□□□□ 0
Hcn3O88705 AC159205.6-201ENSMUST00000224935 887 ntBASIC15.08■□□□□ 0
Hcn3O88705 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Hcn3O88705 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Hcn3O88705 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Hcn3O88705 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Hcn3O88705 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC15.08■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms