Protein–RNA interactions for Protein: O88575

Slc6a20b, Sodium- and chloride-dependent transporter XTRP3B, mousemouse

Predictions only

Length 635 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a20bO88575 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slc6a20bO88575 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Slc6a20bO88575 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Slc6a20bO88575 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc6a20bO88575 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc6a20bO88575 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC17.12■□□□□ 0.33
Slc6a20bO88575 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc6a20bO88575 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc6a20bO88575 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Slc6a20bO88575 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.12■□□□□ 0.33
Slc6a20bO88575 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc6a20bO88575 Gm24158-201ENSMUST00000175263 71 ntBASIC17.12■□□□□ 0.33
Slc6a20bO88575 H2-Pa-201ENSMUST00000182803 626 ntBASIC17.12■□□□□ 0.33
Slc6a20bO88575 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc6a20bO88575 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC17.12■□□□□ 0.33
Slc6a20bO88575 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc6a20bO88575 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc6a20bO88575 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc6a20bO88575 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Slc6a20bO88575 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc6a20bO88575 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc6a20bO88575 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC17.12■□□□□ 0.33
Slc6a20bO88575 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc6a20bO88575 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Slc6a20bO88575 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc6a20bO88575 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc6a20bO88575 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Slc6a20bO88575 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc6a20bO88575 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc6a20bO88575 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc6a20bO88575 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Slc6a20bO88575 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc6a20bO88575 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc6a20bO88575 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Slc6a20bO88575 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc6a20bO88575 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Slc6a20bO88575 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc6a20bO88575 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc6a20bO88575 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Slc6a20bO88575 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Slc6a20bO88575 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC17.11■□□□□ 0.33
Slc6a20bO88575 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC17.11■□□□□ 0.33
Slc6a20bO88575 AC158538.2-201ENSMUST00000225455 906 ntBASIC17.11■□□□□ 0.33
Slc6a20bO88575 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc6a20bO88575 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc6a20bO88575 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc6a20bO88575 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc6a20bO88575 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc6a20bO88575 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc6a20bO88575 Gm13410-201ENSMUST00000117058 1415 ntBASIC17.11■□□□□ 0.33
Slc6a20bO88575 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Slc6a20bO88575 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc6a20bO88575 Wnt10b-206ENSMUST00000228546 2709 ntBASIC17.11■□□□□ 0.33
Slc6a20bO88575 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc6a20bO88575 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc6a20bO88575 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.1■□□□□ 0.33
Slc6a20bO88575 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc6a20bO88575 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc6a20bO88575 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc6a20bO88575 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Slc6a20bO88575 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc6a20bO88575 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc6a20bO88575 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC17.1■□□□□ 0.33
Slc6a20bO88575 Gm16198-201ENSMUST00000118766 670 ntBASIC17.1■□□□□ 0.33
Slc6a20bO88575 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC17.1■□□□□ 0.33
Slc6a20bO88575 Gm12151-201ENSMUST00000121374 290 ntBASIC17.1■□□□□ 0.33
Slc6a20bO88575 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc6a20bO88575 Gm6257-201ENSMUST00000163864 910 ntBASIC17.1■□□□□ 0.33
Slc6a20bO88575 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC17.1■□□□□ 0.33
Slc6a20bO88575 Gm5779-201ENSMUST00000218467 910 ntBASIC17.1■□□□□ 0.33
Slc6a20bO88575 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc6a20bO88575 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc6a20bO88575 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc6a20bO88575 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc6a20bO88575 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc6a20bO88575 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc6a20bO88575 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Slc6a20bO88575 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc6a20bO88575 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc6a20bO88575 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc6a20bO88575 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Slc6a20bO88575 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc6a20bO88575 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc6a20bO88575 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc6a20bO88575 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc6a20bO88575 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc6a20bO88575 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc6a20bO88575 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc6a20bO88575 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc6a20bO88575 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC17.09■□□□□ 0.33
Slc6a20bO88575 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Slc6a20bO88575 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC17.09■□□□□ 0.33
Slc6a20bO88575 Gm37277-201ENSMUST00000194052 1111 ntBASIC17.09■□□□□ 0.33
Slc6a20bO88575 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Slc6a20bO88575 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Slc6a20bO88575 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC17.09■□□□□ 0.33
Slc6a20bO88575 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC17.09■□□□□ 0.33
Slc6a20bO88575 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Slc6a20bO88575 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc6a20bO88575 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms