Protein–RNA interactions for Protein: O88551

Cldn1, Claudin-1, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1O88551 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cldn1O88551 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cldn1O88551 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC13.49□□□□□ -0.25
Cldn1O88551 AC159114.1-201ENSMUST00000220349 266 ntBASIC13.49□□□□□ -0.25
Cldn1O88551 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cldn1O88551 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC13.49□□□□□ -0.25
Cldn1O88551 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cldn1O88551 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cldn1O88551 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cldn1O88551 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cldn1O88551 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Cldn1O88551 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Cldn1O88551 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cldn1O88551 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cldn1O88551 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cldn1O88551 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cldn1O88551 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cldn1O88551 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cldn1O88551 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cldn1O88551 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC13.49□□□□□ -0.25
Cldn1O88551 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cldn1O88551 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Cldn1O88551 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cldn1O88551 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
Cldn1O88551 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
Cldn1O88551 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cldn1O88551 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cldn1O88551 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cldn1O88551 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cldn1O88551 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC13.48□□□□□ -0.25
Cldn1O88551 Gm5837-201ENSMUST00000191844 1369 ntBASIC13.48□□□□□ -0.25
Cldn1O88551 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cldn1O88551 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cldn1O88551 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cldn1O88551 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cldn1O88551 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cldn1O88551 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cldn1O88551 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cldn1O88551 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cldn1O88551 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cldn1O88551 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cldn1O88551 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cldn1O88551 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cldn1O88551 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cldn1O88551 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC13.48□□□□□ -0.25
Cldn1O88551 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cldn1O88551 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cldn1O88551 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC13.48□□□□□ -0.25
Cldn1O88551 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC13.48□□□□□ -0.25
Cldn1O88551 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cldn1O88551 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cldn1O88551 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Cldn1O88551 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cldn1O88551 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cldn1O88551 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Cldn1O88551 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cldn1O88551 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cldn1O88551 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Cldn1O88551 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cldn1O88551 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cldn1O88551 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cldn1O88551 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cldn1O88551 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cldn1O88551 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Cldn1O88551 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cldn1O88551 Gm13127-201ENSMUST00000118978 1389 ntBASIC13.47□□□□□ -0.25
Cldn1O88551 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cldn1O88551 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cldn1O88551 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Cldn1O88551 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cldn1O88551 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Cldn1O88551 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cldn1O88551 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cldn1O88551 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cldn1O88551 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cldn1O88551 AC159106.1-201ENSMUST00000224421 690 ntBASIC13.47□□□□□ -0.25
Cldn1O88551 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cldn1O88551 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cldn1O88551 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Cldn1O88551 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cldn1O88551 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cldn1O88551 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Cldn1O88551 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cldn1O88551 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cldn1O88551 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cldn1O88551 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cldn1O88551 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cldn1O88551 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC13.47□□□□□ -0.25
Cldn1O88551 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cldn1O88551 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Cldn1O88551 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Cldn1O88551 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cldn1O88551 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cldn1O88551 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cldn1O88551 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cldn1O88551 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cldn1O88551 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cldn1O88551 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Cldn1O88551 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cldn1O88551 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms