Protein–RNA interactions for Protein: O88322

Nid2, Nidogen-2, mousemouse

Predictions only

Length 1,403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nid2O88322 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nid2O88322 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nid2O88322 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC20.34■□□□□ 0.85
Nid2O88322 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Nid2O88322 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nid2O88322 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nid2O88322 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
Nid2O88322 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
Nid2O88322 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
Nid2O88322 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nid2O88322 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nid2O88322 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nid2O88322 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nid2O88322 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nid2O88322 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Nid2O88322 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Nid2O88322 AC121598.2-201ENSMUST00000228376 2325 ntBASIC20.33■□□□□ 0.85
Nid2O88322 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Nid2O88322 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Nid2O88322 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Nid2O88322 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC20.33■□□□□ 0.84
Nid2O88322 Gm2810-201ENSMUST00000118681 990 ntBASIC20.33■□□□□ 0.84
Nid2O88322 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC20.33■□□□□ 0.84
Nid2O88322 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Nid2O88322 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Nid2O88322 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Nid2O88322 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
Nid2O88322 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Nid2O88322 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Nid2O88322 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
Nid2O88322 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Nid2O88322 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
Nid2O88322 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
Nid2O88322 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC20.32■□□□□ 0.84
Nid2O88322 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nid2O88322 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nid2O88322 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Nid2O88322 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Nid2O88322 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Nid2O88322 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Nid2O88322 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nid2O88322 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nid2O88322 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC20.32■□□□□ 0.84
Nid2O88322 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Nid2O88322 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Nid2O88322 AC160980.1-201ENSMUST00000224136 970 ntBASIC20.32■□□□□ 0.84
Nid2O88322 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nid2O88322 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nid2O88322 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nid2O88322 Gm2423-201ENSMUST00000074863 733 ntBASIC20.32■□□□□ 0.84
Nid2O88322 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nid2O88322 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Nid2O88322 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nid2O88322 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC20.32■□□□□ 0.84
Nid2O88322 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Nid2O88322 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC20.32■□□□□ 0.84
Nid2O88322 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nid2O88322 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nid2O88322 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC20.32■□□□□ 0.84
Nid2O88322 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nid2O88322 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC20.31■□□□□ 0.84
Nid2O88322 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nid2O88322 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nid2O88322 Gm6415-201ENSMUST00000118488 348 ntBASIC20.31■□□□□ 0.84
Nid2O88322 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Nid2O88322 Gm27306-201ENSMUST00000183970 107 ntBASIC20.31■□□□□ 0.84
Nid2O88322 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Nid2O88322 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC20.31■□□□□ 0.84
Nid2O88322 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC20.31■□□□□ 0.84
Nid2O88322 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC20.31■□□□□ 0.84
Nid2O88322 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Nid2O88322 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nid2O88322 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nid2O88322 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Nid2O88322 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nid2O88322 Gm42900-201ENSMUST00000197184 2167 ntBASIC20.3■□□□□ 0.84
Nid2O88322 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nid2O88322 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC20.3■□□□□ 0.84
Nid2O88322 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
Nid2O88322 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Nid2O88322 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC20.3■□□□□ 0.84
Nid2O88322 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nid2O88322 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Nid2O88322 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Nid2O88322 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nid2O88322 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nid2O88322 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Nid2O88322 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Nid2O88322 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nid2O88322 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC20.3■□□□□ 0.84
Nid2O88322 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Nid2O88322 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nid2O88322 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nid2O88322 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
Nid2O88322 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nid2O88322 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Nid2O88322 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC20.29■□□□□ 0.84
Nid2O88322 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nid2O88322 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Nid2O88322 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms