Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ubr1O70481 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ubr1O70481 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ubr1O70481 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Ubr1O70481 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Ubr1O70481 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ubr1O70481 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Ubr1O70481 Mir7023-201ENSMUST00000185093 64 ntBASIC20.25■□□□□ 0.83
Ubr1O70481 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Ubr1O70481 Gm20949-201ENSMUST00000206478 952 ntBASIC20.25■□□□□ 0.83
Ubr1O70481 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ubr1O70481 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ubr1O70481 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ubr1O70481 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC20.24■□□□□ 0.83
Ubr1O70481 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ubr1O70481 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ubr1O70481 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Ubr1O70481 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ubr1O70481 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ubr1O70481 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Ubr1O70481 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ubr1O70481 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Ubr1O70481 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Ubr1O70481 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ubr1O70481 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Ubr1O70481 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ubr1O70481 Fgf17-202ENSMUST00000227123 1336 ntBASIC20.24■□□□□ 0.83
Ubr1O70481 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Ubr1O70481 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ubr1O70481 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC20.23■□□□□ 0.83
Ubr1O70481 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC20.23■□□□□ 0.83
Ubr1O70481 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ubr1O70481 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ubr1O70481 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Ubr1O70481 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC20.23■□□□□ 0.83
Ubr1O70481 Gm7774-201ENSMUST00000200064 533 ntBASIC20.23■□□□□ 0.83
Ubr1O70481 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ubr1O70481 CT009510.1-201ENSMUST00000227972 270 ntBASIC20.23■□□□□ 0.83
Ubr1O70481 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ubr1O70481 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Ubr1O70481 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ubr1O70481 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ubr1O70481 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ubr1O70481 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ubr1O70481 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ubr1O70481 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC20.23■□□□□ 0.83
Ubr1O70481 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ubr1O70481 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Ubr1O70481 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ubr1O70481 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC20.23■□□□□ 0.83
Ubr1O70481 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Ubr1O70481 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Ubr1O70481 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Ubr1O70481 Gm2810-201ENSMUST00000118681 990 ntBASIC20.23■□□□□ 0.83
Ubr1O70481 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Ubr1O70481 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC20.23■□□□□ 0.83
Ubr1O70481 Gm38294-201ENSMUST00000192831 381 ntBASIC20.23■□□□□ 0.83
Ubr1O70481 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Ubr1O70481 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ubr1O70481 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Ubr1O70481 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Ubr1O70481 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Ubr1O70481 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC20.23■□□□□ 0.83
Ubr1O70481 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Ubr1O70481 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Ubr1O70481 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ubr1O70481 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ubr1O70481 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Ubr1O70481 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ubr1O70481 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Ubr1O70481 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ubr1O70481 Gm13223-201ENSMUST00000118609 747 ntBASIC20.22■□□□□ 0.83
Ubr1O70481 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC20.22■□□□□ 0.83
Ubr1O70481 Gm29541-201ENSMUST00000191351 678 ntBASIC20.22■□□□□ 0.83
Ubr1O70481 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ubr1O70481 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Ubr1O70481 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ubr1O70481 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Ubr1O70481 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ubr1O70481 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ubr1O70481 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ubr1O70481 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ubr1O70481 Gm15693-201ENSMUST00000120470 637 ntBASIC20.21■□□□□ 0.83
Ubr1O70481 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Ubr1O70481 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC20.21■□□□□ 0.83
Ubr1O70481 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC20.21■□□□□ 0.83
Ubr1O70481 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Ubr1O70481 Gm37277-201ENSMUST00000194052 1111 ntBASIC20.21■□□□□ 0.83
Ubr1O70481 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Ubr1O70481 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ubr1O70481 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC20.21■□□□□ 0.83
Ubr1O70481 Wdyhv1-206ENSMUST00000227142 786 ntBASIC20.21■□□□□ 0.83
Ubr1O70481 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ubr1O70481 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Ubr1O70481 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Ubr1O70481 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ubr1O70481 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ubr1O70481 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC20.21■□□□□ 0.83
Ubr1O70481 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ubr1O70481 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms