Protein–RNA interactions for Protein: O70137

Alx3, Homeobox protein aristaless-like 3, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx3O70137 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Alx3O70137 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Alx3O70137 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Alx3O70137 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Alx3O70137 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Alx3O70137 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Alx3O70137 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Alx3O70137 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Alx3O70137 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC14.35□□□□□ -0.11
Alx3O70137 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Alx3O70137 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Alx3O70137 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Alx3O70137 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC14.35□□□□□ -0.11
Alx3O70137 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Alx3O70137 Gm6754-201ENSMUST00000117124 913 ntBASIC14.35□□□□□ -0.11
Alx3O70137 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Alx3O70137 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Alx3O70137 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
Alx3O70137 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Alx3O70137 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Alx3O70137 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Alx3O70137 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Alx3O70137 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Alx3O70137 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Alx3O70137 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Alx3O70137 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Alx3O70137 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC14.35□□□□□ -0.11
Alx3O70137 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Alx3O70137 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Alx3O70137 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Alx3O70137 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC14.35□□□□□ -0.11
Alx3O70137 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Alx3O70137 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Alx3O70137 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Alx3O70137 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Alx3O70137 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Alx3O70137 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Alx3O70137 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Alx3O70137 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Alx3O70137 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Alx3O70137 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Alx3O70137 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Alx3O70137 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Alx3O70137 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC14.34□□□□□ -0.11
Alx3O70137 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
Alx3O70137 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Alx3O70137 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Alx3O70137 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Alx3O70137 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Alx3O70137 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Alx3O70137 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Alx3O70137 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Alx3O70137 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Alx3O70137 AC132265.1-201ENSMUST00000219233 1665 ntBASIC14.34□□□□□ -0.11
Alx3O70137 Gm28196-201ENSMUST00000187719 640 ntBASIC14.34□□□□□ -0.11
Alx3O70137 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC14.34□□□□□ -0.11
Alx3O70137 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC14.34□□□□□ -0.11
Alx3O70137 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Alx3O70137 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Alx3O70137 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Alx3O70137 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Alx3O70137 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Alx3O70137 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Alx3O70137 AC159649.2-201ENSMUST00000222984 3223 ntBASIC14.34□□□□□ -0.11
Alx3O70137 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Alx3O70137 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Alx3O70137 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Alx3O70137 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Alx3O70137 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Alx3O70137 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Alx3O70137 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Alx3O70137 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Alx3O70137 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Alx3O70137 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Alx3O70137 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Alx3O70137 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Alx3O70137 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Alx3O70137 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Alx3O70137 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Alx3O70137 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Alx3O70137 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Alx3O70137 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Alx3O70137 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Alx3O70137 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Alx3O70137 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC14.33□□□□□ -0.12
Alx3O70137 Gm42473-201ENSMUST00000201056 2291 ntBASIC14.33□□□□□ -0.12
Alx3O70137 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Alx3O70137 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC14.33□□□□□ -0.12
Alx3O70137 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC14.33□□□□□ -0.12
Alx3O70137 Gm10052-201ENSMUST00000168019 960 ntBASIC14.33□□□□□ -0.12
Alx3O70137 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Alx3O70137 AC153881.2-201ENSMUST00000214877 204 ntBASIC14.33□□□□□ -0.12
Alx3O70137 Gm7729-201ENSMUST00000050143 801 ntBASIC14.33□□□□□ -0.12
Alx3O70137 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Alx3O70137 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Alx3O70137 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Alx3O70137 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Alx3O70137 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Alx3O70137 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Alx3O70137 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms